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Sample GSM153982 Query DataSets for GSM153982
Status Public on Mar 24, 2008
Title 3T3L1_adipocyte_UCP3
Sample type RNA
 
Source name RNA was collected from 3T3L1 adipocytes expressing Uncoupling Protein 1.
Organism Mus musculus
Characteristics 3T3-L1 adipocytes with control plasmid.
3T3-L1 adipocytes expressing uncoupling protein 1 (UCP1)
Biomaterial provider Jayaraman Laboratory
Growth protocol 3T3-L1 preadipocytes were grown until confluence and differentiated
adipocytes using a standard adipogenic cocktail.
Extracted molecule total RNA
Extraction protocol Adipocytes (10 days after differentiation) were used for extracting total RNA using the Nucleospin II RNA isolation kit (Clontech).
Label biotin
Label protocol Codelink Expression assay protocol.
 
Hybridization protocol Codelink Expression assay protocol.
Scan protocol Codelink Expression assay protocol.
Description RNA quality was assessed using the Agilent 2100 Bioanalyzer.
Data processing CodeLink Expression Analysis 4.1.0.29054
 
Submission date Jan 04, 2007
Last update date Mar 24, 2008
Contact name Arul Jayaraman
Organization name Texas A&M University
Department Artie McFerrin Department of Chemical Engineering
Street address 3122 TAMU
City College Station
State/province TX
ZIP/Postal code 77843-3122
Country USA
 
Platform ID GPL2897
Series (1)
GSE6643 Effect of forced uncoupling protein-1 expression on 3T3-L1 adipocyte gene expression

Data table header descriptions
ID_REF
SIGNAL_RAW Raw signal intensities corrected for background
VALUE Intensity normalized by median of spot-based raw intensity

Data table
ID_REF SIGNAL_RAW VALUE
1001 6939.8818 146.2212
1002 928.7155 19.5677
1003 7.2353 0.1524
1004 70.7125 1.4899
1005 13.1636 0.2774
1006 9.1346 0.1925
1007 6347.8076 133.7463
1008 6893.8477 145.2512
1010 183.3148 3.8624
1012 62.65 1.32
1013 45.5238 0.9592
1014 6728.9697 141.7773
1015 7056.1094 148.67
1017 6.5714 0.1385
1018 11.5082 0.2425
1019 42.5273 0.896
1020 17.878 0.3767
1021 6902.5557 145.4347
1022 7233.8228 152.4144
1024 6.0645 0.1278

Total number of rows: 36227

Table truncated, full table size 773 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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