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Sample GSM154495 Query DataSets for GSM154495
Status Public on Aug 28, 2007
Title H1819 Control group treatment
Sample type RNA
 
Source name NSCLC cell line
Organism Homo sapiens
Characteristics See publication for details
Treatment protocol Control treatment group. DMSO qod for 6 days.
Growth protocol See publication for details.
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Affymetrix
 
Hybridization protocol please see the Southwestern Medical Center Microarray Core Facility website for details
Scan protocol please see the Southwestern Medical Center Microarray Core Facility website for details
Description H1819 Control treatment group. DMSO qod for 6 days.
Data processing Raw signal data without normalization
 
Submission date Jan 09, 2007
Last update date Aug 28, 2018
Contact name David S Shames
E-mail(s) shames.david@gene.com
Phone 650-225-7559
Organization name Genentech Inc
Department Oncology Biomarker Development
Lab Shames
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (2)
GSE5816 A Genome-wide Screen for Hypermethylated Genes in Lung Cancer
GSE6695 Genome-wide screen for promoter methylation in NSCLC identifies novel methylation markers for multiple malignancies
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE Raw signal

Data table
ID_REF VALUE
AFFX-BioB-5_at 562.6
AFFX-BioB-M_at 848.3
AFFX-BioB-3_at 494.5
AFFX-BioC-5_at 1703.3
AFFX-BioC-3_at 2024.6
AFFX-BioDn-5_at 3728.8
AFFX-BioDn-3_at 8619.3
AFFX-CreX-5_at 17372.6
AFFX-CreX-3_at 18829.8
AFFX-DapX-5_at 27.5
AFFX-DapX-M_at 33.8
AFFX-DapX-3_at 16.2
AFFX-LysX-5_at 16.5
AFFX-LysX-M_at 16.3
AFFX-LysX-3_at 1.7
AFFX-PheX-5_at 5.9
AFFX-PheX-M_at 10.2
AFFX-PheX-3_at 41.7
AFFX-ThrX-5_at 38.9
AFFX-ThrX-M_at 5.3

Total number of rows: 54675

Table truncated, full table size 850 Kbytes.




Supplementary file Size Download File type/resource
GSM154495.CEL.gz 8.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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