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Sample GSM2417242 Query DataSets for GSM2417242
Status Public on Jun 26, 2017
Title muscle_control_animal6901_rep1
Sample type RNA
 
Source name tibialis anterior
Organism Mus musculus
Characteristics strain: C57BL6/J;129S1/SvImJ
tissue: muscle, tibialis anterior
age: 6 months old
genotype: Myf6 cre/+; Hira flox/+
Extracted molecule total RNA
Extraction protocol Tibialis anterior muscles were dissected in PBS and flash frozen in liquid nitrogen. RNA was extracted using Trizol reagent.
Label Cy3
Label protocol 5 micrograms Cy5-labelled total RNA
 
Hybridization protocol Phalanx Biotech One Array Plus protocol. Each sample was hybridized in triplicate.
Scan protocol Agilent 0.1 XDR protocol
Data processing Normalization was performed using median scaling normalization method
 
Submission date Dec 05, 2016
Last update date Jun 27, 2017
Contact name M. David Stewart
Organization name University of Houston
Street address 4800 Calhoun Rd
City Houston
State/province TX
ZIP/Postal code 77204-5001
Country USA
 
Platform ID GPL13692
Series (1)
GSE90900 Effect of a myofiber-specific HIRA conditional knockout on gene expression in mouse skeletal muscle at 6 months of age

Data table header descriptions
ID_REF
VALUE Normalized Signal Intensity

Data table
ID_REF VALUE
mMC000770 23040.93535
mMC000772 47959.36641
mMC000773 1623.344728
mMC000774 36476.9319
mMC000776 133.339782
mMC000780 1576.810039
mMC000784 231.7785472
mMC000785 1451.524338
mMC000790 794.6693047
mMC000792 134.2346798
mMC000796 13200.63842
mMC000801 870.7356233
mMC000804 2372.374242
mMC000805 209.4061006
mMC000811 14508.9791
mMC000813 3416.720051
mMC000817 17344.91043
mMC000821 211.1958963
mMC000826 119.0214161
mMC000828 1200.058038

Total number of rows: 26423

Table truncated, full table size 633 Kbytes.




Supplementary file Size Download File type/resource
GSM2417242_H007-3111107229.gpr.gz 1.5 Mb (ftp)(http) GPR
Processed data included within Sample table

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