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Sample GSM524639 Query DataSets for GSM524639
Status Public on May 10, 2010
Title Bcl6 -/- BCR-ABL1-transformed B cell precursors - untreated 1
Sample type RNA
 
Source name Extracted bone marrow cells of Bcl6 knockout mouse
Organism Mus musculus
Characteristics cell type: Bcl6 -/- BCR-ABL1-transformed B cell precursors
treatment: untreated
genetic background: C57Bl6/129Sv
gender: male
tissue: bone marrow
age: 4 weeks
Extracted molecule total RNA
Extraction protocol Extraction Method: Qiagen_RNeasy_Kit
Label Biotin
Label protocol Standard Affymetrix protocols (Affymetrix GeneChip Expression Analysis Technical Manual) was used. The complete protocol is available on the manufacturer's web site.
 
Hybridization protocol Standard Affymetrix protocols (see GeneChip Expression Analysis Technical Manual)
Scan protocol Standard Affymetrix protocols (see GeneChip Expression Analysis Technical Manual)
Description BCR-ABL1-transformed Bcl6 knockout B cell precursors were cultured without STI571 (Imatinib)
Data processing RMA
 
Submission date Mar 19, 2010
Last update date Aug 28, 2018
Contact name Markus Müschen
E-mail(s) mmuschen@chla.usc.edu
Phone + 1 323 361 5592
Fax +1 323 361 1516
URL http://www.lymphocytes.de/
Organization name University of Southern California
Department Childrens Hospital Los Angeles
Lab Müschen Lab
Street address 4650 Sunset Blvd
City Los Angeles
State/province CA
ZIP/Postal code 90027
Country USA
 
Platform ID GPL1261
Series (1)
GSE20987 Gene expression data of BCR-ABL1 transformed B cell precursors from BCL6 wild-type and BCL6 knockout mice
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA calculated signal intensities

Data table
ID_REF VALUE
1415670_at 511.63
1415671_at 726.35
1415672_at 1657.80
1415673_at 714.03
1415674_a_at 559.77
1415675_at 420.77
1415676_a_at 2114.30
1415677_at 240.35
1415678_at 744.21
1415679_at 1899.24
1415680_at 860.59
1415681_at 1073.69
1415682_at 516.62
1415683_at 1414.41
1415684_at 345.28
1415685_at 751.95
1415686_at 360.25
1415687_a_at 1682.57
1415688_at 950.70
1415689_s_at 154.85

Total number of rows: 45101

Table truncated, full table size 775 Kbytes.




Supplementary file Size Download File type/resource
GSM524639_P240_A_Mouse430_2_01_1__7_.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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