NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM98836 Query DataSets for GSM98836
Status Public on Apr 03, 2006
Title MGU74Bv2_day1_PGC1a_rep3
Sample type RNA
 
Source name myoblast (C2C12 cells) differentiated into myotubes
Organism Mus musculus
Characteristics Cell line: C2C12
Growth protocol C2C12 cells were cultured in DMEM containing 10% calf serum. They were then cultured in DMEM containing 2% heat-inactivated bovine calf serum for 3 days to induce differentiation into myotubes.
Extracted molecule total RNA
Label biotin
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Gene expression data from cells on day1 after transduction with PGC-1alpha.
Data processing The timecourse data from this platform were sample normalized via linear fit to the median scan, using Present genes.
 
Submission date Mar 03, 2006
Last update date Apr 03, 2006
Contact name Vamsi K. Mootha
Organization name Broad Institute
Department Medical and Population Genetics
Lab Mootha
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL82
Series (1)
GSE4330 Mitochondrial biogenesis induced by PGC-1alpha

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)

Data table
ID_REF VALUE ABS_CALL
104769_at 2.8708346 A
104770_at 4.6138415 A
104771_at 5.741669 A
104772_at 10.047922 A
104773_at 1.3328875 A
104774_at 1.5379472 A
104775_at 33.32219 A
104776_at 3.6910732 A
104777_at 1.127828 A
104778_at 21.633791 A
104779_at 65.41402 A
104780_at 6.049259 A
104781_at 3.5885434 A
104782_at 40.909397 A
104783_at 3.7936032 A
104784_at 15.687061 A
104785_at 9.842862 A
104786_at 1.0252981 A
104787_at 5.844199 A
104788_at 20.198374 A

Total number of rows: 12477

Table truncated, full table size 267 Kbytes.




Supplementary file Size Download File type/resource
GSM98836.CEL.gz 2.8 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap