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    SBE22 Sbe22p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856503, updated on 29-Jun-2024

    Summary

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    Gene symbol
    SBE22
    Gene description
    Sbe22p
    Primary source
    FungiDB:YHR103W
    Locus tag
    YHR103W
    See related
    SGD:S000001145; AllianceGenome:SGD:S000001145; VEuPathDB:YHR103W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in fungal-type cell wall organization. Located in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See SBE22 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (320414..322972)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Big1p Neighboring gene putative serine/threonine protein kinase KIC1 Neighboring gene trifunctional aldehyde reductase/xylose reductase/glucose 1-dehydrogenase (NADP(+)) Neighboring gene Ypt35p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Exploring whole-genome duplicate gene retention with complex genetic interaction analysis. Kuzmin E, et al. Science, 2020 Jun 26. PMID 32586993, Free PMC Article
    2. Genome-wide association analysis of clinical vs. nonclinical origin provides insights into Saccharomyces cerevisiae pathogenesis. Muller LA, et al. Mol Ecol, 2011 Oct. PMID 21880084, Free PMC Article
    3. A genome-wide immunodetection screen in S. cerevisiae uncovers novel genes involved in lysosomal vacuole function and morphology. Ricarte F, et al. PLoS One, 2011. PMID 21912603, Free PMC Article
    4. Sbe2p and sbe22p, two homologous Golgi proteins involved in yeast cell wall formation. Santos B, et al. Mol Biol Cell, 2000 Feb. PMID 10679005, Free PMC Article
    5. Functional analysis of the Saccharomyces cerevisiae YFR021w/YGR223c/YPL100w ORF family suggests relations to mitochondrial/peroxisomal functions and amino acid signalling pathways. Georgakopoulos T, et al. Yeast, 2001 Sep 15. PMID 11536337

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in fungal-type cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in fungal-type cell wall organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Sbe22p
    NP_011971.1
    • Protein involved in bud growth; involved in the transport of cell wall components from the Golgi to the cell surface; similar in structure and functionally redundant with Sbe2p; SBE22 has a paralog, SBE2, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      320414..322972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179233.1 → NP_011971.1  TPA: Sbe22p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011971.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A6ZT11, D3DL53, P38814
      UniProtKB/TrEMBL
      A0A8H4FB60, B3LSL8, N1P280
      Conserved Domains (1) summary
      pfam17076
      Location:14 → 852
      SBE2; cell-wall formation
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38814.1

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