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    Wt1os WT1 transcription factor, opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 329480, updated on 17-Aug-2024

    Summary

    Official Symbol
    Wt1osprovided by MGI
    Official Full Name
    WT1 transcription factor, opposite strandprovided by MGI
    Primary source
    MGI:MGI:2138884
    See related
    Ensembl:ENSMUSG00000074987 AllianceGenome:MGI:2138884
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Wt1-as; 6030498F17
    Summary
    Orthologous to human WT1-AS (WT1 antisense RNA). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in ovary adult (RPKM 1.6), subcutaneous fat pad adult (RPKM 0.8) and 5 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Wt1os in Genome Data Viewer
    Location:
    2 E2- E3; 2 55.06 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (104906883..104956855, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (105076538..105126510, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 38521 Neighboring gene NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_05302 Neighboring gene Wt1 promoter region Neighboring gene WT1 transcription factor Neighboring gene STARR-seq mESC enhancer starr_05304 Neighboring gene thioesterase superfamily member 7 Neighboring gene STARR-seq mESC enhancer starr_05306 Neighboring gene STARR-seq mESC enhancer starr_05307

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Other Names

    • WT1 antisense RNA
    • Wilms tumor 1 homolog, opposite strand

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_015462.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK031729, AK032905, AK165089
      Related
      ENSMUST00000172701.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      104906883..104956855 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)