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    Gm20747 predicted gene, 20747 [ Mus musculus (house mouse) ]

    Gene ID: 434960, updated on 8-Feb-2024

    Summary

    Official Symbol
    Gm20747provided by MGI
    Official Full Name
    predicted gene, 20747provided by MGI
    Primary source
    MGI:MGI:5434103
    See related
    Ensembl:ENSMUSG00000094729 AllianceGenome:MGI:5434103
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable methylated histone binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See Gm20747 in Genome Data Viewer
    Location:
    Y; Y C1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) Y NC_000087.8 (53412536..53414886, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) Y NC_000087.7 (53415957..53418307, complement)

    Chromosome Y - NC_000087.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 21275 Neighboring gene predicted gene, 21285 Neighboring gene predicted gene, 20929 Neighboring gene vomeronasal 2, receptor, pseudogene 150

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • MGC107173

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables methylated histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025241.3NP_001020412.1  Ssty2 family member

      See identical proteins and their annotated locations for NP_001020412.1

      Status: VALIDATED

      Source sequence(s)
      AC147606
      Consensus CDS
      CCDS85884.1
      UniProtKB/TrEMBL
      Q5FWB5, Q62456
      Related
      ENSMUSP00000139491.2, ENSMUST00000187856.2
      Conserved Domains (1) summary
      pfam02513
      Location:2169
      Spin-Ssty; Spin/Ssty Family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000087.8 Reference GRCm39 C57BL/6J

      Range
      53412536..53414886 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)