LOC4324187 inorganic phosphate transporter 1-11-like [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: LOC4324187
Gene description: inorganic phosphate transporter 1-11-like
Locus tag: OSNPB_010657100
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: PT11; OsPT11; PHT1-11; OsPht1;11; OsJ_002785
Expression: Restricted expression toward roots before flowering (RPKM 115.1) See more
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Genomic context

Location:: chromosome: 1

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
102	current	IRGSP-1.0 (GCF_001433935.1)	1	NC_029256.1 (26724816..26727206, complement)

Chromosome 1 - NC_029256.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:: NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

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Expression

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See details

Project title: Transcriptome profiling of various organs at different developmental stages in rice
Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
BioProject: PRJNA243371
Publication: PMID 26387578
Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables phosphate transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in phosphate ion transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: inorganic phosphate transporter 1-11

Names: H(+)/Pi cotransporter; LOC_Os01g46860; P0694A04.21; high affinity phosphate transporter 11; putative phosphate transport protein PT1; putative phosphate transporter OsPT11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001406102.1 → NP_001393031.1 inorganic phosphate transporter 1-11

Status: VALIDATED

Source sequence(s)

AF536960, AP014957, CI025438, CI658787

UniProtKB/Swiss-Prot

A0A0P0V633, Q8GRJ0, Q94DB8

UniProtKB/TrEMBL

A2WTE4, Q8S319

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

NC_029256.1 Reference IRGSP-1.0 Primary Assembly

Range

26724816..26727206 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015777869.2 → XP_015633355.1 inorganic phosphate transporter 1-11

UniProtKB/Swiss-Prot

Q94DB8

Conserved Domains (1) summary

TIGR00887
Location:12 → 510

2A0109; phosphate:H+ symporter