LOC4348577 sucrose transport protein SUT3-like [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: LOC4348577
Gene description: sucrose transport protein SUT3-like
Locus tag: OSNPB_100404500
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: SUT3; OsSUT3
Expression: Biased expression in flowers (RPKM 12.2) and flower buds (RPKM 10.2) See more
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Genomic context

Location:: chromosome: 10

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
102	current	IRGSP-1.0 (GCF_001433935.1)	10	NC_029265.1 (13778529..13785209)

Chromosome 10 - NC_029265.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:: NC_029265.1 Chromosome 10 Reference IRGSP-1.0 Primary Assembly

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Expression

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See details

Project title: Transcriptome profiling of various organs at different developmental stages in rice
Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
BioProject: PRJNA243371
Publication: PMID 26387578
Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables sucrose:proton symporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: sucrose transport protein SUT3

Names: LOC_Os10g26470; OSJNBb0044I14.9; Os10g0404533; Os10g0404566; Sucrose permease 3; Sucrose transporter 3; Sucrose-proton symporter 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001423024.1 → NP_001409953.1 sucrose transport protein SUT3

Status: VALIDATED

Source sequence(s)

AB071809, CI272409

UniProtKB/Swiss-Prot

B8BGQ9, Q944W2, Q948L0, Q94GL2

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

NC_029265.1 Reference IRGSP-1.0 Primary Assembly

Range

13778529..13785209

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015758288.2 → XP_015613774.1 sucrose transport protein SUT3

UniProtKB/Swiss-Prot

Q948L0

Conserved Domains (1) summary

TIGR01301
Location:21 → 494

GPH_sucrose; GPH family sucrose/H+ symporter