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    LOC4346866 protein IAL1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4346866, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4346866
    Gene description
    protein IAL1
    Locus tag
    OSNPB_090364100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1001_G09.15
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    Genomic context

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    See LOC4346866 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (16299539..16300985)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (11942721..11944291)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene protein HOTHEAD Neighboring gene uncharacterized LOC107278961 Neighboring gene zinc finger CCCH domain-containing protein 59-like Neighboring gene uncharacterized LOC4346868 Neighboring gene GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein IAL1
    Names
    LOB domain-containing protein 19
    Os09g0364100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      16299539..16300985
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015755677.3 → XP_015611163.2  protein IAL1

      UniProtKB/TrEMBL
      A2Z0E5
      Conserved Domains (1) summary
      pfam03195
      Location:72 → 170
      DUF260; Protein of unknown function DUF260
    Nucleotide Protein
    Heading Accession and Version

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