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    LOC4324826 glycerol-3-phosphate 2-O-acyltransferase 6 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324826, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4324826
    Gene description
    glycerol-3-phosphate 2-O-acyltransferase 6
    Locus tag
    OSNPB_010855000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4324826 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (37490003..37493347, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (36863031..36871097, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136355001 Neighboring gene cytochrome P450 86A1 Neighboring gene uncharacterized LOC112937601 Neighboring gene uncharacterized LOC4324827

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycerol-3-phosphate 2-O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cutin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycerol-3-phosphate 2-O-acyltransferase 6
    Names
    B1096A10.22-1
    Os01g0855000
    phospholipid/glycerol acyltransferase-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      37490003..37493347 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015766664.3 → XP_015622150.1  glycerol-3-phosphate 2-O-acyltransferase 6

      UniProtKB/TrEMBL
      A0A0P0VAG7, B8ACG2, Q0JHM5, Q5N7U2
      Conserved Domains (1) summary
      PLN02177
      Location:1 → 494
      PLN02177; glycerol-3-phosphate acyltransferase
    Nucleotide Protein
    Heading Accession and Version

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