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    LOC4325529 peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325529, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4325529
    Gene description
    peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
    Locus tag
    OSNPB_010208400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (5885323..5887603, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (5875754..5877843, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112938205 Neighboring gene WAT1-related protein At5g64700 Neighboring gene WAT1-related protein At5g64700 Neighboring gene uncharacterized LOC107280810 Neighboring gene phosphoenolpyruvate carboxylase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in vacuole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
    Names
    OSJNBa0016I09.19
    Os01g0208400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      5885323..5887603 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015775832.3 → XP_015631318.1  peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A

      UniProtKB/TrEMBL
      A0A8J8YP02, A2WLX6, A2ZQJ0, Q0JPQ8, Q8LRI2
      Conserved Domains (1) summary
      pfam12222
      Location:65 → 483
      PNGaseA; Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
    Nucleotide Protein
    Heading Accession and Version

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