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    LOC4352356 uncharacterized LOC4352356 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4352356, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4352356
    Gene description
    uncharacterized LOC4352356
    Locus tag
    OSNPB_120518000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Broad expression in flowers (RPKM 1.9), flower buds (RPKM 1.8) and 5 other tissues See more
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    Genomic context

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    See LOC4352356 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (20624454..20627678, complement)

    Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136354589 Neighboring gene transposon Tf2-1 polyprotein Neighboring gene WAT1-related protein At5g64700 Neighboring gene small nucleolar RNA Z247

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_089046.1 Chromosome 12 Reference ASM3414082v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized protein LOC4352356
    Names
    Os12g0518000

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

      Range
      20624454..20627678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066306262.1 → XP_066162359.1  uncharacterized protein LOC4352356 isoform X1

    2. XM_066306266.1 → XP_066162363.1  uncharacterized protein LOC4352356 isoform X2

    3. XM_066306264.1 → XP_066162361.1  uncharacterized protein LOC4352356 isoform X2

    4. XM_066306265.1 → XP_066162362.1  uncharacterized protein LOC4352356 isoform X2

    5. XM_066306263.1 → XP_066162360.1  uncharacterized protein LOC4352356 isoform X2

    6. XM_066306267.1 → XP_066162364.1  uncharacterized protein LOC4352356 isoform X3

    7. XM_066306268.1 → XP_066162365.1  uncharacterized protein LOC4352356 isoform X4

    RNA

    1. XR_010738372.1 RNA Sequence

    2. XR_010738394.1 RNA Sequence

    3. XR_010738402.1 RNA Sequence

    4. XR_010738379.1 RNA Sequence

    5. XR_010738392.1 RNA Sequence

    6. XR_010738370.1 RNA Sequence

    7. XR_010738368.1 RNA Sequence

    8. XR_010738373.1 RNA Sequence

    9. XR_010738371.1 RNA Sequence

    10. XR_010738389.1 RNA Sequence

    11. XR_010738369.1 RNA Sequence

    12. XR_010738399.1 RNA Sequence

    13. XR_010738391.1 RNA Sequence

    14. XR_010738388.1 RNA Sequence

    15. XR_010738381.1 RNA Sequence

    16. XR_010738406.1 RNA Sequence

    17. XR_010738382.1 RNA Sequence

    18. XR_010738407.1 RNA Sequence

    19. XR_010738393.1 RNA Sequence

    20. XR_010738400.1 RNA Sequence

    21. XR_010738390.1 RNA Sequence

    22. XR_010738387.1 RNA Sequence

    23. XR_010738374.1 RNA Sequence

    24. XR_010738398.1 RNA Sequence

    25. XR_010738395.1 RNA Sequence

    26. XR_010738377.1 RNA Sequence

    27. XR_010738378.1 RNA Sequence

    28. XR_010738397.1 RNA Sequence

    29. XR_010738396.1 RNA Sequence

    30. XR_010738376.1 RNA Sequence

    31. XR_010738375.1 RNA Sequence

    32. XR_010738380.1 RNA Sequence

    33. XR_010738383.1 RNA Sequence

    34. XR_010738403.1 RNA Sequence

    35. XR_010738385.1 RNA Sequence

    36. XR_010738405.1 RNA Sequence

    37. XR_010738384.1 RNA Sequence

    38. XR_010738408.1 RNA Sequence

    39. XR_010738404.1 RNA Sequence

    40. XR_010738409.1 RNA Sequence

    41. XR_010738401.1 RNA Sequence

    42. XR_010738386.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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