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    LOC4346945 zinc finger AN1 domain-containing stress-associated protein 17-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4346945, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4346945
    Gene description
    zinc finger AN1 domain-containing stress-associated protein 17-like
    Locus tag
    OSNPB_090385700
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    SAP17; OsSAP17
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    Genomic context

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    See LOC4346945 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (17512495..17513369, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (13154932..13155964, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4346944 Neighboring gene uncharacterized LOC107275523 Neighboring gene U-box domain-containing protein 40 Neighboring gene enhanced ethylene response protein 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger AN1 domain-containing stress-associated protein 17
    Names
    LOC_Os09g21710
    OSJNBa0048A13.10
    zinc finger (AN1-like)-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001422753.1 → NP_001409682.1  zinc finger AN1 domain-containing stress-associated protein 17

      Status: VALIDATED

      Source sequence(s)
      AP014965, AU161865, CI312581, CI770364
      UniProtKB/Swiss-Prot
      A0A0P0XL53, Q6H595

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      17512495..17513369 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6H595.1 GenPept UniProtKB/Swiss-Prot:Q6H595

    Gene LinkOut

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