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    LOC4342003 non-specific lipid-transfer protein 2P [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342003, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4342003
    Gene description
    non-specific lipid-transfer protein 2P
    Locus tag
    OSNPB_060705400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (30676488..30677067)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (29807806..29808415)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112936035 Neighboring gene pentatricopeptide repeat-containing protein At3g03580 Neighboring gene pentatricopeptide repeat-containing protein At4g21065-like Neighboring gene uncharacterized LOC4342004 Neighboring gene protein NRT1/ PTR FAMILY 8.3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    non-specific lipid-transfer protein 2P
    Names
    Os06g0705400
    P0018H04.13-1
    P0621D05.1-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      30676488..30677067
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785961.3 → XP_015641447.1  non-specific lipid-transfer protein 2P

      UniProtKB/TrEMBL
      A0A0P0X0K5, Q5Z8V0
      Conserved Domains (1) summary
      cd01959
      Location:30 → 92
      nsLTP2; nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and ...
    Nucleotide Protein
    Heading Accession and Version

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