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    LOC4338700 peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4338700, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4338700
    Gene description
    peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
    Locus tag
    OSNPB_050395000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4338700 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (19222115..19224436, complement)

    Chromosome 5 - NC_029260.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107281072 Neighboring gene probable serine/threonine-protein kinase kinX Neighboring gene DUF21 domain-containing protein At4g14240 Neighboring gene two-component response regulator ORR27-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029260.1 Chromosome 5 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein α -Subunit. Biswal AK, et al. Proteomics, 2019 May. PMID 30866160
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in vacuole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
    Names
    Os05g0395000

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029260.1 Reference IRGSP-1.0 Primary Assembly

      Range
      19222115..19224436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015784574.2 → XP_015640060.1  peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A

      UniProtKB/TrEMBL
      A0A0P0WM01, B8AY06, Q6AU72, Q75HW4
      Conserved Domains (1) summary
      pfam12222
      Location:59 → 492
      PNGaseA; Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
    Nucleotide Protein
    Heading Accession and Version

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