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    LOC4348147 Putative B3 domain-containing protein Os10g0158600 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4348147, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4348147
    Gene description
    Putative B3 domain-containing protein Os10g0158600
    Locus tag
    OSNPB_100158625
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsJ_30781
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    Genomic context

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    See LOC4348147 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (3729128..3757804)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (3701689..3730365)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 1-like Neighboring gene bisdemethoxycurcumin synthase-like Neighboring gene uncharacterized LOC9271747 Neighboring gene uncharacterized LOC136353672

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative B3 domain-containing protein Os10g0158600
    Names
    LOC_Os10g07060
    OSJNAa0036D19.3
    OSJNBa0036D19.9
    Os10g0158700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      3729128..3757804
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026020899.1 → XP_025876684.1  putative B3 domain-containing protein Os10g0158600

      Conserved Domains (1) summary
      cl15242
      Location:72 → 153
      BfiI_C_EcoRII_N_B3; DNA binding domains of BfiI, EcoRII and plant B3 proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7XGM6.1 GenPept UniProtKB/Swiss-Prot:Q7XGM6

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