LOC4329775 14-3-3-like protein GF14-E [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: LOC4329775
Gene description: 14-3-3-like protein GF14-E
Locus tag: OSNPB_020580300
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: GID2; GF14E; OsJ_07268; OJ1115_A05.5-1
Expression: Ubiquitous expression in roots before flowering (RPKM 52.0), flowers (RPKM 50.7) and 6 other tissues See more
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Genomic context

Location:: chromosome: 2

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_06	current	ASM3414082v1 (GCF_034140825.1)	2	NC_089036.1 (22814840..22819234)
102	previous assembly	IRGSP-1.0 (GCF_001433935.1)	2	NC_029257.1 (22333215..22337612)

Chromosome 2 - NC_089036.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
BioProject: PRJNA243371
Publication: PMID 26387578
Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Confirmed the interaction between OsCPK21 and one of its putative targets, Os14-3-3 (OsGF14e). We used an in vitro kinase assay and site-directed mutagenesis to verify that OsCPK21 phosphorylates OsGF14e at Tyr-138.
Title: Calcium-dependent protein kinase 21 phosphorylates 14-3-3 proteins in response to ABA signaling and salt stress in rice.

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General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in protein localization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in signal transduction	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: 14-3-3-like protein GF14-E

Names: B1267B06.30-1; F-box protein GID2; G-box factor 14-3-3 homolog E; Gibberellin-insensitive dwarf protein 2; LOC_Os02g36974; Protein GIBBERELLIN INSENSITIVE DWARF2; putative GF14-b protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001401888.1 → NP_001388817.1 14-3-3-like protein GF14-E

Status: VALIDATED

Source sequence(s)

AK104907, CI613211

UniProtKB/Swiss-Prot

Q0E040, Q6EUP4, Q9M3X9

UniProtKB/TrEMBL

A2X6G8
NM_001401890.1 → NP_001388819.1 14-3-3-like protein GF14-E

Status: VALIDATED

Source sequence(s)

AK066506, AK104907

UniProtKB/Swiss-Prot

Q0E040, Q6EUP4, Q9M3X9

UniProtKB/TrEMBL

A2X6G8