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    LOC9269723 calmodulin-binding protein 25 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9269723, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9269723
    Gene description
    calmodulin-binding protein 25
    Locus tag
    OSNPB_030320600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9269723 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (11568402..11569554, complement)

    Chromosome 3 - NC_029258.1Genomic Context describing neighboring genes Neighboring gene alpha-L-arabinofuranosidase 1-like Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 Neighboring gene probable inactive receptor kinase At5g10020 Neighboring gene guanylate kinase 2, chloroplastic/mitochondrial-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029258.1 Chromosome 3 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to osmotic stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calmodulin-binding protein 25
    Names
    Os03g0320600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029258.1 Reference IRGSP-1.0 Primary Assembly

      Range
      11568402..11569554 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015773627.2 → XP_015629113.1  calmodulin-binding protein 25

      UniProtKB/TrEMBL
      A0A8J8XDA1, A2XG34, A3AHE7, C7IZP4, Q10M76
      Conserved Domains (1) summary
      pfam05678
      Location:109 → 132
      VQ; VQ motif
    Nucleotide Protein
    Heading Accession and Version

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