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    LOC9266125 zinc finger CCCH domain-containing protein 47-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9266125, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9266125
    Gene description
    zinc finger CCCH domain-containing protein 47-like
    Locus tag
    OSNPB_070138400
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsC3H47; OsJ_022124; OJ1417_E01.106
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    Genomic context

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    See LOC9266125 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (2035171..2036769, complement)

    Chromosome 7 - NC_029262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107281751 Neighboring gene small nucleolar RNA Z223 Neighboring gene small nucleolar RNA U36a Neighboring gene putative zinc finger CCCH domain-containing protein 48 Neighboring gene ABC transporter G family member 16-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029262.1 Chromosome 7 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger CCCH domain-containing protein 47
    Names
    LOC_Os07g04580
    P0495H05.46

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001424149.1 → NP_001411078.1  zinc finger CCCH domain-containing protein 47

      Status: VALIDATED

      Source sequence(s)
      AK111433, AP014963
      UniProtKB/Swiss-Prot
      A0A0P0X240, Q8GW05
      UniProtKB/TrEMBL
      A2YI04

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029262.1 Reference IRGSP-1.0 Primary Assembly

      Range
      2035171..2036769 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015791018.2 → XP_015646504.1  zinc finger CCCH domain-containing protein 47

      UniProtKB/Swiss-Prot
      Q8GW05
      Conserved Domains (1) summary
      pfam18345
      Location:327 → 345
      zf_CCCH_4; Zinc finger domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GW05.1 GenPept UniProtKB/Swiss-Prot:Q8GW05

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