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    LOC4342123 zinc finger protein ZAT2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342123, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4342123
    Gene description
    zinc finger protein ZAT2
    Locus tag
    OSNPB_060727000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4342123 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (31806259..31807112, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (30935760..30936606, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene cyclin-B2-2-like Neighboring gene U-box domain-containing protein 15 Neighboring gene catalase isozyme B-like Neighboring gene probable galacturonosyltransferase 3 Neighboring gene probable serine/threonine-protein kinase PIX13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    zinc finger protein ZAT2
    Names
    Os06g0727000
    P0017G10.15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      31806259..31807112 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015787351.2 → XP_015642837.1  zinc finger protein ZAT2

      UniProtKB/TrEMBL
      A0A0P0X1H5, A2YH63, Q0D9C5, Q5Z7P5
      Conserved Domains (1) summary
      pfam13912
      Location:107 → 130
      zf-C2H2_6; C2H2-type zinc finger
    Nucleotide Protein
    Heading Accession and Version

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