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    LOC4349289 cyclin-dependent protein kinase inhibitor SMR1-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349289, updated on 6-Jun-2024

    Summary

    Gene symbol
    LOC4349289
    Gene description
    cyclin-dependent protein kinase inhibitor SMR1-like
    Locus tag
    OSNPB_100546400
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    SMR1
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    Genomic context

    See LOC4349289 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (21360018..21361079, complement)

    Chromosome 10 - NC_029265.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4349287 Neighboring gene syndetin Neighboring gene uncharacterized LOC112936673 Neighboring gene carotene epsilon-monooxygenase, chloroplastic Neighboring gene uncharacterized LOC107278998 Neighboring gene probable E3 ubiquitin-protein ligase ATL45

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_029265.1 Chromosome 10 Reference IRGSP-1.0 Primary Assembly

    General protein information

    Preferred Names
    cyclin-dependent protein kinase inhibitor SMR1
    Names
    LOC_Os10g39920
    OSJNBa0001O14.8
    Protein SIAMESE-RELATED 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423099.1NP_001410028.1  cyclin-dependent protein kinase inhibitor SMR1

      Status: VALIDATED

      Source sequence(s)
      CI172007, CI203938, CI307667, CI307913
      UniProtKB/Swiss-Prot
      A0A0P0XX55, Q7XCI3, Q9AV28
      UniProtKB/TrEMBL
      B8BI39, B9G6V0

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029265.1 Reference IRGSP-1.0 Primary Assembly

      Range
      21360018..21361079 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015758941.2XP_015614427.1  cyclin-dependent protein kinase inhibitor SMR1

      UniProtKB/Swiss-Prot
      Q9AV28