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    LOC4340844 probable carboxylesterase 18 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340844, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4340844
    Gene description
    probable carboxylesterase 18
    Locus tag
    OSNPB_060306600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4340844 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (11768372..11770082)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (11585943..11587724)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene peroxidase 1-like Neighboring gene aspartyl protease family protein At5g10770 Neighboring gene uncharacterized LOC107281170 Neighboring gene uncharacterized LOC136357141 Neighboring gene uncharacterized LOC9271139

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable carboxylesterase 18
    Names
    B1386G10.30
    Os06g0306600
    putative esterase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      11768372..11770082
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785813.3 → XP_015641299.1  probable carboxylesterase 18

      UniProtKB/TrEMBL
      A0A0P0WW18, A2YC54, Q5Z4C9
      Conserved Domains (1) summary
      pfam07859
      Location:101 → 329
      Abhydrolase_3; alpha/beta hydrolase fold
    Nucleotide Protein
    Heading Accession and Version

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