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    LOC4326052 probable inactive purple acid phosphatase 16 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326052, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4326052
    Gene description
    probable inactive purple acid phosphatase 16
    Locus tag
    OSNPB_010941800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4326052 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (42035445..42037344, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (41384313..41386408, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene glucan endo-1,3-beta-glucosidase, acidic isoform-like Neighboring gene glucan endo-1,3-beta-glucosidase GII Neighboring gene uncharacterized LOC107281124 Neighboring gene uncharacterized LOC107275494

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable inactive purple acid phosphatase 16
    Names
    Os01g0941800
    P0432C03.25-1
    purple acid phosphatase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      42035445..42037344 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015787011.3 → XP_015642497.1  probable inactive purple acid phosphatase 16

      UniProtKB/TrEMBL
      A0A8J8YN65, A2WYY0, A3A1E8, Q0JG53, Q8S9P9
      Conserved Domains (1) summary
      cd07383
      Location:49 → 345
      MPP_Dcr2; Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain
    Nucleotide Protein
    Heading Accession and Version

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