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    LOC4332343 protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332343, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4332343
    Gene description
    protein ENDOPLASMIC RETICULUM-ARRESTED PEN3
    Locus tag
    OSNPB_030264700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4332343 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (8766520..8770047, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (8715693..8719871, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene anthranilate synthase alpha subunit 2, chloroplastic-like Neighboring gene uncharacterized LOC4332342 Neighboring gene uncharacterized LOC4332344 Neighboring gene sulfoquinovosyl transferase SQD2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ENDOPLASMIC RETICULUM-ARRESTED PEN3
    Names
    BTB/POZ domain-containing protein At3g09030
    Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence B4-BTB2
    Os03g0264700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      8766520..8770047 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066308640.1 → XP_066164737.1  protein ENDOPLASMIC RETICULUM-ARRESTED PEN3

      UniProtKB/TrEMBL
      Q0DT81, Q84QB5
    Nucleotide Protein
    Heading Accession and Version

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