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    LOC4327184 cytochrome P450 71A1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327184, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4327184
    Gene description
    cytochrome P450 71A1
    Locus tag
    OSNPB_010227800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Broad expression in leaves before flowering (RPKM 5.4), leaves after flowering (RPKM 5.2) and 4 other tissues See more
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    Genomic context

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    See LOC4327184 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (7082301..7084694)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (7071465..7073872)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136357396 Neighboring gene cytochrome P450 71A1 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570 Neighboring gene uncharacterized LOC4327186

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 71A1
    Names
    Os01g0227800
    P0452F10.15
    putative Cytochrome P450 71A1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      7082301..7084694
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015793837.3 → XP_015649323.1  cytochrome P450 71A1

      UniProtKB/TrEMBL
      A0A0P0V0F6, Q0JPE0
      Conserved Domains (1) summary
      cl12078
      Location:52 → 537
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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