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    LOC4330796 SNW/SKI-interacting protein A-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330796, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4330796
    Gene description
    SNW/SKI-interacting protein A-like
    Locus tag
    OSNPB_020759800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1175_B01.11
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    Genomic context

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    See LOC4330796 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (32490641..32492997, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (31995311..31997705, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At1g73400, mitochondrial Neighboring gene transport inhibitor response 1-like protein Neighboring gene protein CURVATURE THYLAKOID 1D, chloroplastic Neighboring gene uncharacterized LOC4330798

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SNW/SKI-interacting protein A-like
    Names
    Os02g0759800
    putative GAMYB-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      32490641..32492997 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015770866.3 → XP_015626352.1  SNW/SKI-interacting protein A-like

      UniProtKB/Swiss-Prot
      Q6K8D9
      UniProtKB/TrEMBL
      A2X9U4
      Conserved Domains (1) summary
      pfam02731
      Location:194 → 349
      SKIP_SNW; SKIP/SNW domain
    Nucleotide Protein
    Heading Accession and Version

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