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    LOC4324574 probable glutathione S-transferase GSTU6 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324574, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4324574
    Gene description
    probable glutathione S-transferase GSTU6
    Locus tag
    OSNPB_010558100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    B1064G04.4
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    Genomic context

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    See LOC4324574 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (21114710..21115891, complement)

    Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene vacuolar cation/proton exchanger 1a-like Neighboring gene uncharacterized LOC107281538 Neighboring gene NADP-specific glutamate dehydrogenase Neighboring gene RWD domain-containing protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glutathione metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable glutathione S-transferase GSTU6
    Names
    B1144D11.26
    Os01g0558100
    putative tau class GST protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

      Range
      21114710..21115891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015764028.2 → XP_015619514.1  probable glutathione S-transferase GSTU6

      UniProtKB/TrEMBL
      A2WRC9, A2ZUD1, Q0JLY2, Q7F2U3, Q8S9U5
      Conserved Domains (2) summary
      cd03185
      Location:108 → 238
      GST_C_Tau; C-terminal, alpha helical domain of Class Tau Glutathione S-transferases
      cd03058
      Location:15 → 88
      GST_N_Tau; GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, ...
    Nucleotide Protein
    Heading Accession and Version

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