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    LOC4337737 uncharacterized LOC4337737 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4337737, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4337737
    Gene description
    uncharacterized LOC4337737
    Locus tag
    OSNPB_050136400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Broad expression in flowers (RPKM 13.2), flower buds (RPKM 13.0) and 6 other tissues See more
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (2138280..2141692)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (2124184..2127836)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9267386 Neighboring gene CBL-interacting protein kinase 17-like Neighboring gene uncharacterized LOC136356522 Neighboring gene acyl transferase 4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized protein LOC4337737

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      2138280..2141692
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066310810.1 → XP_066166907.1  uncharacterized protein LOC4337737 isoform X4

    2. XM_066310811.1 → XP_066166908.1  uncharacterized protein LOC4337737 isoform X5

    3. XM_066310808.1 → XP_066166905.1  uncharacterized protein LOC4337737 isoform X2

    4. XM_066310809.1 → XP_066166906.1  uncharacterized protein LOC4337737 isoform X3

    5. XM_066310807.1 → XP_066166904.1  uncharacterized protein LOC4337737 isoform X1

    RNA

    1. XR_010741582.1 RNA Sequence

    2. XR_001545696.3 RNA Sequence

    3. XR_010741584.1 RNA Sequence

    4. XR_003242473.2 RNA Sequence

    5. XR_003242472.2 RNA Sequence

    6. XR_010741583.1 RNA Sequence

    7. XR_010741585.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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