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    LOC4339226 scopoletin glucosyltransferase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339226, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4339226
    Gene description
    scopoletin glucosyltransferase
    Locus tag
    OSNPB_050499800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4339226 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (24605720..24607926)

    Chromosome 5 - NC_029260.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase 73C5 Neighboring gene PE-PGRS family protein PE_PGRS26-like Neighboring gene scopoletin glucosyltransferase Neighboring gene scopoletin glucosyltransferase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029260.1 Chromosome 5 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    scopoletin glucosyltransferase
    Names
    Os05g0499800

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029260.1 Reference IRGSP-1.0 Primary Assembly

      Range
      24605720..24607926
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015783660.2 → XP_015639146.1  scopoletin glucosyltransferase

      UniProtKB/TrEMBL
      A0A0P0WPB4, A2ZEH5, Q0DH00, Q6AUW6
      Conserved Domains (1) summary
      cl10013
      Location:4 → 471
      Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
    Nucleotide Protein
    Heading Accession and Version

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