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    KIAA2012-AS1 KIAA2012 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 729224, updated on 17-Sep-2024

    Summary

    Official Symbol
    KIAA2012-AS1provided by HGNC
    Official Full Name
    KIAA2012 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:41164
    See related
    Ensembl:ENSG00000222035 AllianceGenome:HGNC:41164
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 3.7) See more
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    Genomic context

    See KIAA2012-AS1 in Genome Data Viewer
    Location:
    2q33.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (202087555..202117058, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (202568468..202597980, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (202952278..202981781, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:202903328-202904527 Neighboring gene uncharacterized LOC124906114 Neighboring gene small nucleolar RNA U13 Neighboring gene KIAA2012 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16997 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:203013826-203014679 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:203035623-203036441 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16998 Neighboring gene proteasome subunit alpha 2 pseudogene 3 Neighboring gene DAZ associated protein 2 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_135243.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site in the 5' region and contains an alternate 3' terminal exon, and is shorter than variant 1.
      Source sequence(s)
      AC079354, BC040292, CR737339, HY024648, HY045443, HY208135
      Related
      ENST00000670761.1
    2. NR_135244.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AC079354, BC040292, DB055974, DB338922, HY045443

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      202087555..202117058 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      202568468..202597980 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)