U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Snord87 small nucleolar RNA, C/D box 87 [ Mus musculus (house mouse) ]

    Gene ID: 266793, updated on 8-Feb-2024

    Summary

    Official Symbol
    Snord87provided by MGI
    Official Full Name
    small nucleolar RNA, C/D box 87provided by MGI
    Primary source
    MGI:MGI:2387894
    See related
    Ensembl:ENSMUSG00000093178 AllianceGenome:MGI:2387894
    Gene type
    snoRNA
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    U87; Rnu87; MBII-276
    Summary
    Predicted to enable rRNA 2'-O-ribose methylation guide activity. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Snord87 in Genome Data Viewer
    Location:
    1 A2; 1 2.22 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (10012695..10012768, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (9942470..9942543, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene serum/glucocorticoid regulated kinase 3 Neighboring gene mitochondrial ribosomal protein S36 pseudogene Neighboring gene minichromosome maintenance domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E4304 Neighboring gene small nucleolar RNA host gene 6 Neighboring gene transcription factor 24 Neighboring gene protein phosphatase 1, regulatory subunit 42 Neighboring gene STARR-seq mESC enhancer starr_00178 Neighboring gene STARR-seq mESC enhancer starr_00179 Neighboring gene predicted gene, 24674

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • RNA, U87 small nucleolar
    • snoRNA U87

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables rRNA 2'-O-ribose methylation guide activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_004410.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AF396686
      Related
      ENSMUST00000175437.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      10012695..10012768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)