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    Gm16062 predicted gene 16062 [ Mus musculus (house mouse) ]

    Gene ID: 100504104, updated on 8-Feb-2024

    Summary

    Official Symbol
    Gm16062provided by MGI
    Official Full Name
    predicted gene 16062provided by MGI
    Primary source
    MGI:MGI:3802162
    See related
    Ensembl:ENSMUSG00000087249 AllianceGenome:MGI:3802162
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 10.3), CNS E14 (RPKM 6.9) and 26 other tissues See more
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    Genomic context

    See Gm16062 in Genome Data Viewer
    Location:
    11 B1.3; 11 37.8 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (59700906..59709188)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (59810080..59818362)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene myosin phosphatase Rho interacting protein Neighboring gene predicted gene, 51899 Neighboring gene phospholipase D family member 6 Neighboring gene folliculin Neighboring gene STARR-seq mESC enhancer starr_29631 Neighboring gene COP9 signalosome subunit 3 Neighboring gene STARR-positive B cell enhancer ABC_E5233 Neighboring gene STARR-positive B cell enhancer ABC_E2354 Neighboring gene predicted gene, 51946 Neighboring gene 5',3'-nucleotidase, mitochondrial

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045686.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC068808, AL596204
      Related
      ENSMUST00000151825.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      59700906..59709188
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)