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    LOC9266867 NAC domain-containing protein 58-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9266867, updated on 12-Jul-2024

    Summary

    Gene symbol
    LOC9266867
    Gene description
    NAC domain-containing protein 58-like
    Locus tag
    OSNPB_070683200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Biased expression in leaves after flowering (RPKM 37.1), flower buds (RPKM 12.7) and 3 other tissues See more
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    Genomic context

    See LOC9266867 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (29219623..29221757)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (28985790..28987954)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At5g39570 Neighboring gene probable apyrase 2 Neighboring gene ricin B-like lectin R40C1 Neighboring gene ricin B-like lectin R40G3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    General protein information

    Preferred Names
    NAC domain-containing protein 58-like
    Names
    Os07g0683200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      29219623..29221757
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015792004.3XP_015647490.1  NAC domain-containing protein 58-like

      UniProtKB/TrEMBL
      B8B641, B9FUX7
      Conserved Domains (1) summary
      pfam02365
      Location:13138
      NAM; No apical meristem (NAM) protein