Chromosome neighbors for GEO Profiles (Select 102010591) - GEO Profiles

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Items: 20

Select item 1020105911.

NPHP3-ACAD11 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: NPHP3-ACAD11, NPHP3-ACAD11 readthrough (NMD candidate) (multiple annotations exist)

Organism:: Homo sapiens

Reporter:: GPL6244, 8090737 (ID_REF), GDS4762, NM_153240, AY257864, BC068082, BC131729, CR749498, NR_037804, BC063277, AK055893, chr3:132399454-132441276 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102010591

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 1020098312.

UBA5 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: UBA5, ubiquitin like modifier activating enzyme 5

Organism:: Homo sapiens

Reporter:: GPL6244, 8082750 (ID_REF), GDS4762, NM_198329, AK310239, AL832669, BC048015, NM_024818, XM_006713752, AL136757, AY253672, BC009737, AB154406, chr3:132379146-132396622 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009831

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 1020105903.

NPHP3-ACAD11 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: NPHP3-ACAD11, NPHP3-ACAD11 readthrough (NMD candidate) (multiple annotations exist)

Organism:: Homo sapiens

Reporter:: GPL6244, 8090715 (ID_REF), GDS4762, NR_037804, AK131265, AL832873, NM_032169, BC125204, BC125205, chr3:132276985-132378926 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102010590

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 1020098304.

ACKR4 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: ACKR4, atypical chemokine receptor 4

Organism:: Homo sapiens

Reporter:: GPL6244, 8082745 (ID_REF), GDS4762, NM_178445, chr3:132316094-132321382 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009830

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 1020139315.

ACKR4 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: ACKR4, atypical chemokine receptor 4

Organism:: Homo sapiens

Reporter:: GPL6244, 8122334 (ID_REF), GDS4762, NM_016557, NM_178445, AF110640, BC069438, chr6:139143884-139144936 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102013931

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 1020098296.

DNAJC13 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: DNAJC13, DnaJ heat shock protein family (Hsp40) member C13

Organism:: Homo sapiens

Reporter:: GPL6244, 8082688 (ID_REF), GDS4762, NM_015268, AY779857, BC043583, BC151246, chr3:132136553-132257876 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009829

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 1020098287.

ACPP - Fibroblast response to coculture with basal breast cancer cells

Annotation:: ACPP, acid phosphatase, prostate

Organism:: Homo sapiens

Reporter:: GPL6244, 8082673 (ID_REF), GDS4762, NM_001099, NM_001134194, NM_001292037, AB102888, BC007460, BC008493, BC016344, BC017877, M24902, M34840, chr3:132036248-132087142 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009828

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 1020098328.

TMEM108 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: TMEM108, transmembrane protein 108

Organism:: Homo sapiens

Reporter:: GPL6244, 8082767 (ID_REF), GDS4762, NM_001136469, NM_023943, AY358381, BC000568, AB051477, NM_001282865, chr3:132757235-133115058 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009832

GEO DataSets Gene Chromosome neighbors Homologene neighbors

Select item 1020098339.

BFSP2 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: BFSP2, beaded filament structural protein 2

Organism:: Homo sapiens

Reporter:: GPL6244, 8082774 (ID_REF), GDS4762, NM_003571, BC113518, BC113520, U48224, chr3:133118790-133194056 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009833

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 10201058910.

CPNE4 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: CPNE4, copine 4

Organism:: Homo sapiens

Reporter:: GPL6244, 8090690 (ID_REF), GDS4762, NM_001289112, NM_130808, NM_153429, AF465770, AF465771, BC075046, BC014396, chr3:131252413-131759165 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102010589

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 10200966711.

CDV3 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: CDV3, CDV3 homolog

Organism:: Homo sapiens

Reporter:: GPL6244, 8081135 (ID_REF), GDS4762, NM_001134422, NM_001134423, NM_001282762, NM_001282763, NM_001282765, NM_017548, chr3:96496091-96496536 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009667

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 10200983512.

CDV3 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: CDV3, CDV3 homolog

Organism:: Homo sapiens

Reporter:: GPL6244, 8082788 (ID_REF), GDS4762, NM_001134422, NM_001134423, NM_001282762, NM_001282763, NM_001282764, NM_001282765, NM_017548, BC007338, chr3:133292567-133309105 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009835

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 10201059313.

TOPBP1 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: TOPBP1, topoisomerase (DNA) II binding protein 1

Organism:: Homo sapiens

Reporter:: GPL6244, 8090772 (ID_REF), GDS4762, NM_007027, AB019397, BC126209, BC151237, chr3:133319450-133380690 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102010593

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 10200983714.

TF - Fibroblast response to coculture with basal breast cancer cells

Annotation:: TF, transferrin

Organism:: Homo sapiens

Reporter:: GPL6244, 8082797 (ID_REF), GDS4762, NM_001063, BC059367, DQ923758, M12530, S95936, AF118063, chr3:133465235-133497635 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009837

GEO DataSets Gene Chromosome neighbors Homologene neighbors

Select item 10200983815.

SRPRB - Fibroblast response to coculture with basal breast cancer cells

Annotation:: SRPRB, SRP receptor beta subunit

Organism:: Homo sapiens

Reporter:: GPL6244, 8082816 (ID_REF), GDS4762, NM_021203, AF086914, AF141882, BC063001, BC065299, chr3:133524639-133539525 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009838

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 10201059516.

RAB6B - Fibroblast response to coculture with basal breast cancer cells

Annotation:: RAB6B, RAB6B, member RAS oncogene family

Organism:: Homo sapiens

Reporter:: GPL6244, 8090803 (ID_REF), GDS4762, NM_016577, AF166492, AF498940, BC002510, BC078662, BT007263, chr3:133543079-133614691 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102010595

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 10201058817.

SNORA58 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: SNORA58, small nucleolar RNA, H/ACA box 58

Organism:: Homo sapiens

Reporter:: GPL6244, 8090688 (ID_REF), GDS4762, NR_002985, chr3:131197940-131198077 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102010588

GEO DataSets Gene Profile neighbors Chromosome neighbors

Select item 10201058718.

MRPL3 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: MRPL3, mitochondrial ribosomal protein L3

Organism:: Homo sapiens

Reporter:: GPL6244, 8090678 (ID_REF), GDS4762, NM_007208, BC003375, CR456720, chr3:131181045-131221833 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102010587

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

Select item 10201059619.

C3orf36 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: C3orf36, chromosome 3 open reading frame 36

Organism:: Homo sapiens

Reporter:: GPL6244, 8090817 (ID_REF), GDS4762, NM_025041, BC104161, BC104162, chr3:133646989-133648656 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102010596

GEO DataSets Gene Chromosome neighbors

Select item 10200982720.

NUDT16 - Fibroblast response to coculture with basal breast cancer cells

Annotation:: NUDT16, nudix hydrolase 16

Organism:: Homo sapiens

Reporter:: GPL6244, 8082667 (ID_REF), GDS4762, NM_001171905, NM_152395, NR_033268, BC031215, NM_001171906, chr3:131100616-131104929 (SPOT ID)

DataSet type:: Expression profiling by array, count, 80 samples

ID:: 102009827

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

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