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Select item 103702121.

Spatially resolved cell atlas of the teleost telencephalon and deep homology of the vertebrate forebrain

Brianna E. Hegarty, George W. Gruenhagen, Zachary V. Johnson, Cristina M. Baker, Jeffrey T. Streelman

Version 1. bioRxiv. Preprint. 2023 Jul 22. doi: 10.1101/2023.07.20.549873

Published in:: Commun Biol. 2024; 7: 612.

PMCID:: PMC10370212

Abstract Article PDF–13M

Select item 75533492.

Automatic Classification of Cichlid Behaviors Using 3D Convolutional Residual Networks

Lijiang Long, Zachary V. Johnson, Junyu Li, Tucker J. Lancaster, Vineeth Aljapur, Jeffrey T. Streelman, Patrick T. McGrath

iScience. 2020 Oct 23; 23(10): 101591. Published online 2020 Sep 19. doi: 10.1016/j.isci.2020.101591

PMCID:: PMC7553349

Abstract Article PDF–7.4M

Select item 64088933.

Pleiotropic jaw morphology links the evolution of mechanical modularity and functional feeding convergence in Lake Malawi cichlids

C. Darrin Hulsey, Michael E. Alfaro, Jimmy Zheng, Axel Meyer, Roi Holzman

Proc Biol Sci. 2019 Feb 27; 286(1897): 20182358. Published online 2019 Feb 20. doi: 10.1098/rspb.2018.2358

PMCID:: PMC6408893

Abstract Article PDF–802K

Select item 62631794.

Phylogenomics of a putatively convergent novelty: did hypertrophied lips evolve once or repeatedly in Lake Malawi cichlid fishes?

C. Darrin Hulsey, Jimmy Zheng, Roi Holzman, Michael E. Alfaro, Melisa Olave, Axel Meyer

BMC Evol Biol. 2018; 18: 179. Published online 2018 Nov 29. doi: 10.1186/s12862-018-1296-9

PMCID:: PMC6263179

Abstract Article PDF–2.8M

Select item 39540405.

Advances in genomics of bony fish

Herman P. Spaink, Hans J. Jansen, Ron P. Dirks

Brief Funct Genomics. 2014 Mar; 13(2): 144–156. Published online 2013 Nov 29. doi: 10.1093/bfgp/elt046

PMCID:: PMC3954040

Abstract Article PDF–203K

Select item 36312366.

Behaviours Associated with Acoustic Communication in Nile Tilapia (Oreochromis niloticus)

Nicolas Longrie, Pascal Poncin, Mathieu Denoël, Vincent Gennotte, Johann Delcourt, Eric Parmentier

PLoS One. 2013; 8(4): e61467. Published online 2013 Apr 19. doi: 10.1371/journal.pone.0061467

PMCID:: PMC3631236

Abstract Article PDF–780K

Select item 36407387.

Common developmental pathways link tooth shape to regeneration

Gareth J. Fraser, Ryan F. Bloomquist, J. Todd Streelman

Dev Biol. Author manuscript; available in PMC 2014 May 15.

Published in final edited form as: Dev Biol. 2013 May 15; 377(2): 399–414. Published online 2013 Feb 17. doi: 10.1016/j.ydbio.2013.02.007

PMCID:: PMC3640738

Abstract Article PDF–4.5M

Select item 104253538.

Cellular profiling of a recently-evolved social behavior in cichlid fishes

Zachary V. Johnson, Brianna E. Hegarty, George W. Gruenhagen, Tucker J. Lancaster, Patrick T. McGrath, Jeffrey T. Streelman

Nat Commun. 2023; 14: 4891. Published online 2023 Aug 14. doi: 10.1038/s41467-023-40331-9

PMCID:: PMC10425353

Abstract Article PDF–7.6M

Select item 88905059.

Sex Differences in Aggression Are Paralleled by Differential Activation of the Brain Social Decision-Making Network in Zebrafish

María Florencia Scaia, Ibukun Akinrinade, Giovanni Petri, Rui F. Oliveira

Front Behav Neurosci. 2022; 16: 784835. Published online 2022 Feb 16. doi: 10.3389/fnbeh.2022.784835

PMCID:: PMC8890505

Abstract Article PDF–11M

Select item 821725110.

Genome-enabled discovery of evolutionary divergence in brains and behavior

Chinar Patil, Jonathan B. Sylvester, Kawther Abdilleh, Michael W. Norsworthy, Karen Pottin, Milan Malinsky, Ryan F. Bloomquist, Zachary V. Johnson, Patrick T. McGrath, Jeffrey T. Streelman

Sci Rep. 2021; 11: 13016. Published online 2021 Jun 21. doi: 10.1038/s41598-021-92385-8

PMCID:: PMC8217251

Abstract Article PDF–4.8M

Select item 803280111.

Olfactory function in the trace amine-associated receptor family (TAARs) evolved twice independently

Milan Dieris, Daniel Kowatschew, Sigrun I. Korsching

Sci Rep. 2021; 11: 7807. Published online 2021 Apr 8. doi: 10.1038/s41598-021-87236-5

PMCID:: PMC8032801

Abstract Article PDF–1.6M

Select item 768897812.

Automated measurement of long-term bower behaviors in Lake Malawi cichlids using depth sensing and action recognition

Zachary V. Johnson, Manu Tej Sharma Arrojwala, Vineeth Aljapur, Tyrone Lee, Tucker J. Lancaster, Mark C. Lowder, Karen Gu, Joseph I. Stockert, Rachel L. Lecesne, Jean M. Moorman, Jeffrey T. Streelman, Patrick T. McGrath

Sci Rep. 2020; 10: 20573. Published online 2020 Nov 25. doi: 10.1038/s41598-020-77549-2

PMCID:: PMC7688978

Abstract Article PDF–2.5M

Select item 748695813.

Multiple Invasions of Visitor, a DD41D Family of Tc1/mariner Transposons, throughout the Evolution of Vertebrates

Dan Shen, Bo Gao, Csaba Miskey, Cai Chen, Yatong Sang, Wencheng Zong, Saisai Wang, Yali Wang, Xiaoyan Wang, Zoltán Ivics, Chengyi Song

Genome Biol Evol. 2020 Jul; 12(7): 1060–1073. Published online 2020 Jun 30. doi: 10.1093/gbe/evaa135

PMCID:: PMC7486958

Abstract Article PDF–1.2M

Select item 740208214.

Ecotype differences in aggression, neural activity, and behaviorally relevant gene expression in cichlid fish

Nicole M. Baran, J. Todd Streelman

Genes Brain Behav. Author manuscript; available in PMC 2020 Aug 4.

Published in final edited form as: Genes Brain Behav. 2020 Jul; 19(6): e12657. Published online 2020 May 8. doi: 10.1111/gbb.12657

PMCID:: PMC7402082

Abstract Article PDF–1.2M

Select item 693450115.

Behavioral evolution contributes to hindbrain diversification among Lake Malawi cichlid fish

Ryan A. York, Allie Byrne, Kawther Abdilleh, Chinar Patil, Todd Streelman, Thomas E. Finger, Russell D. Fernald

Sci Rep. 2019; 9: 19994. Published online 2019 Dec 27. doi: 10.1038/s41598-019-55894-1

PMCID:: PMC6934501

Abstract Article PDF–1.6M

Select item 630369816.

Dissecting a potential spandrel of adaptive radiation: Body depth and pectoral fin ecomorphology coevolve in Lake Malawi cichlid fishes

Christopher D. Hulsey, Roi Holzman, Axel Meyer

Ecol Evol. 2018 Dec; 8(23): 11945–11953. Published online 2018 Nov 6. doi: 10.1002/ece3.4651

PMCID:: PMC6303698

Abstract Article PDF–835K

Select item 625517817.

Behavior-dependent cis regulation reveals genes and pathways associated with bower building in cichlid fishes

Ryan A. York, Chinar Patil, Kawther Abdilleh, Zachary V. Johnson, Matthew A. Conte, Martin J. Genner, Patrick T. McGrath, Hunter B. Fraser, Russell D. Fernald, J. Todd Streelman

Proc Natl Acad Sci U S A. 2018 Nov 20; 115(47): E11081–E11090. Published online 2018 Nov 5. doi: 10.1073/pnas.1810140115

PMCID:: PMC6255178

Abstract Article PDF–1.8M

Select item 597427718.

Genome-wide microRNA screening in Nile tilapia reveals pervasive isomiRs’ transcription, sex-biased arm switching and increasing complexity of expression throughout development

Danillo Pinhal, Luiz A. Bovolenta, Simon Moxon, Arthur C. Oliveira, Pedro G. Nachtigall, Marcio L. Acencio, James G. Patton, Alexandre W. S. Hilsdorf, Ney Lemke, Cesar Martins

Sci Rep. 2018; 8: 8248. Published online 2018 May 29. doi: 10.1038/s41598-018-26607-x