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Select item 110225651.

The prokaryotic and eukaryotic microbiome of Pacific oyster spat is shaped by ocean warming but not acidification

Kevin Xu Zhong, Amy M. Chan, Brenna Collicutt, Maxim Daspe, Jan F. Finke, Megan Foss, Timothy J. Green, Christopher D. G. Harley, Amelia V. Hesketh, Kristina M. Miller, Sarah P. Otto, Kate Rolheiser, Rob Saunders, Ben J. G. Sutherland, Curtis A. Suttle

Appl Environ Microbiol. 2024 Apr; 90(4): e00052-24. Published online 2024 Mar 11. doi: 10.1128/aem.00052-24

PMCID:: PMC11022565

Abstract Article PDF–9.5M

Select item 101448272.

Metabarcoding and Metabolomics Reveal the Effect of the Invasive Alien Tree Miconia calvescens DC. on Soil Diversity on the Tropical Island of Mo’orea (French Polynesia)

Camille Clerissi, Slimane Chaïb, Delphine Raviglione, Benoit Espiau, Cédric Bertrand, Jean-Yves Meyer

Microorganisms. 2023 Apr; 11(4): 832. Published online 2023 Mar 24. doi: 10.3390/microorganisms11040832

PMCID:: PMC10144827

Abstract Article PDF–5.3M

Select item 95024063.

Exploring LSU and ITS rDNA Sequences for Acanthamoeba Identification and Phylogeny

Daniele Corsaro

Microorganisms. 2022 Sep; 10(9): 1776. Published online 2022 Sep 3. doi: 10.3390/microorganisms10091776

PMCID:: PMC9502406

Abstract Article PDF–2.0M

Select item 94248094.

Prevalence of free-living amoebae in swimming pools and recreational waters, a systematic review and meta-analysis

Beni Jequicene Mussengue Chaúque, Denise Leal dos Santos, Davood Anvari, Marilise Brittes Rott

Parasitol Res. 2022; 121(11): 3033–3050. Published online 2022 Aug 30. doi: 10.1007/s00436-022-07631-3

PMCID:: PMC9424809

Abstract Article PDF–1.7M

Select item 99804375.

Variation of natural selection in the Amoebozoa reveals heterogeneity across the phylogeny and adaptive evolution in diverse lineages

Fang Wang, Yonas I. Tekle

Front Ecol Evol. Author manuscript; available in PMC 2023 Mar 2.

Published in final edited form as: Front Ecol Evol. 2022; 10: 851816. Published online 2022 Aug 4. doi: 10.3389/fevo.2022.851816

PMCID:: PMC9980437

Abstract Article PDF–1.0M

Select item 89103896.

Linking Soil Microbial Diversity to Modern Agriculture Practices: A Review

Amrita Gupta, Udai B. Singh, Pramod K. Sahu, Surinder Paul, Adarsh Kumar, Deepti Malviya, Shailendra Singh, Pandiyan Kuppusamy, Prakash Singh, Diby Paul, Jai P. Rai, Harsh V. Singh, Madhab C. Manna, Theodore C. Crusberg, Arun Kumar, Anil K. Saxena

Int J Environ Res Public Health. 2022 Mar; 19(5): 3141. Published online 2022 Mar 7. doi: 10.3390/ijerph19053141

PMCID:: PMC8910389

Abstract Article PDF–547K

Select item 88572487.

Thermophiles and carbohydrate-active enzymes (CAZymes) in biofilm microbial consortia that decompose lignocellulosic plant litters at high temperatures

Kok Jun Liew, Chee Hung Liang, Yee Ting Lau, Amira Suriaty Yaakop, Kok-Gan Chan, Saleha Shahar, Mohd Shahir Shamsir, Kian Mau Goh

Sci Rep. 2022; 12: 2850. Published online 2022 Feb 18. doi: 10.1038/s41598-022-06943-9

PMCID:: PMC8857248

Abstract Article PDF–2.2M

Select item 76787838.

EukRef-excavates: seven curated SSU ribosomal RNA gene databases

Martin Kolisko, Olga Flegontova, Anna Karnkowska, Gordon Lax, Julia M Maritz, Tomáš Pánek, Petr Táborský, Jane M Carlton, Ivan Čepička, Aleš Horák, Julius Lukeš, Alastair G B Simpson, Vera Tai

Database (Oxford) 2020; 2020: baaa080. Published online 2020 Nov 20. doi: 10.1093/database/baaa080

PMCID:: PMC7678783

Abstract Article PDF–2.7M

Select item 75326509.

Trophic interactions as determinants of the arbuscular mycorrhizal fungal community with cascading plant-promoting consequences

Yuji Jiang, Lu Luan, Kaijie Hu, Manqiang Liu, Ziyun Chen, Stefan Geisen, Xiaoyun Chen, Huixin Li, Qinsong Xu, Michael Bonkowski, Bo Sun

Microbiome. 2020; 8: 142. Published online 2020 Oct 2. doi: 10.1186/s40168-020-00918-6

PMCID:: PMC7532650

Abstract Article PDF–2.9M

Select item 649200610.

Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes

Sina M. Adl, David Bass, Christopher E. Lane, Julius Lukeš, Conrad L. Schoch, Alexey Smirnov, Sabine Agatha, Cedric Berney, Matthew W. Brown, Fabien Burki, Paco Cárdenas, Ivan Čepička, Lyudmila Chistyakova, Javier del Campo, Micah Dunthorn, Bente Edvardsen, Yana Eglit, Laure Guillou, Vladimír Hampl, Aaron A. Heiss, Mona Hoppenrath, Timothy Y. James, Anna Karnkowska, Sergey Karpov, Eunsoo Kim, Martin Kolisko, Alexander Kudryavtsev, Daniel J.G. Lahr, Enrique Lara, Line Le Gall, Denis H. Lynn, David G. Mann, Ramon Massana, Edward A.D. Mitchell, Christine Morrow, Jong Soo Park, Jan W. Pawlowski, Martha J. Powell, Daniel J. Richter, Sonja Rueckert, Lora Shadwick, Satoshi Shimano, Frederick W. Spiegel, Guifré Torruella, Noha Youssef, Vasily Zlatogursky, Qianqian Zhang

J Eukaryot Microbiol. 2019 Jan-Feb; 66(1): 4–119. Published online 2019 Jan 19. doi: 10.1111/jeu.12691

PMCID:: PMC6492006

Abstract Article PDF–1.5M

Select item 633447511.

First Viruses Infecting the Marine Diatom Guinardia delicatula

Laure Arsenieff, Nathalie Simon, Fabienne Rigaut-Jalabert, Florence Le Gall, Samuel Chaffron, Erwan Corre, Emmanuelle Com, Estelle Bigeard, Anne-Claire Baudoux

Front Microbiol. 2018; 9: 3235. Published online 2019 Jan 9. doi: 10.3389/fmicb.2018.03235

PMCID:: PMC6334475

Abstract Article PDF–2.5M

Select item 585046612.

Between a Pod and a Hard Test: The Deep Evolution of Amoebae

Seungho Kang, Alexander K Tice, Frederick W Spiegel, Jeffrey D Silberman, Tomáš Pánek, Ivan Čepička, Martin Kostka, Anush Kosakyan, Daniel M C Alcântara, Andrew J Roger, Lora L Shadwick, Alexey Smirnov, Alexander Kudryavtsev, Daniel J G Lahr, Matthew W Brown

Mol Biol Evol. 2017 Sep; 34(9): 2258–2270. Published online 2017 May 15. doi: 10.1093/molbev/msx162

PMCID:: PMC5850466

Abstract Article PDF–968K

Select item 506951013.

Evolution of bacterial recombinase A (recA) in eukaryotes explained by addition of genomic data of key microbial lineages

Paulo G. Hofstatter, Alexander K. Tice, Seungho Kang, Matthew W. Brown, Daniel J. G. Lahr

Proc Biol Sci. 2016 Oct 12; 283(1840): 20161453. doi: 10.1098/rspb.2016.1453

PMCID:: PMC5069510

Abstract Article PDF–405K

Select item 503573314.

Resource Partitioning between Bacteria, Fungi, and Protists in the Detritusphere of an Agricultural Soil

Susanne Kramer, Dörte Dibbern, Julia Moll, Maike Huenninghaus, Robert Koller, Dirk Krueger, Sven Marhan, Tim Urich, Tesfaye Wubet, Michael Bonkowski, François Buscot, Tillmann Lueders, Ellen Kandeler

Front Microbiol. 2016; 7: 1524. Published online 2016 Sep 26. doi: 10.3389/fmicb.2016.01524

PMCID:: PMC5035733

Abstract Article PDF–1.1M

Select item 415507515.

Free-living amoebae (FLA) co-occurring with legionellae in industrial waters

Ute Scheikl, Regina Sommer, Alexander Kirschner, Alexandra Rameder, Barbara Schrammel, Irene Zweimüller, Wolfgang Wesner, Manfred Hinker, Julia Walochnik

Eur J Protistol. 2014 Aug; 50(4): 422–429. doi: 10.1016/j.ejop.2014.04.002