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Items: 1 to 20 of 64

1.
Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5′ exonuclease-mediated nucleic acid degradation
Yvette Roske, Cedric Cappel, Nils Cremer, Patrick Hoffmann, Tomas Koudelka, Andreas Tholey, Udo Heinemann, Oliver Daumke, Markus Damme
Nucleic Acids Res. 2024 Jan 11; 52(1): 370–384. Published online 2023 Nov 22. doi: 10.1093/nar/gkad1114
PMCID:
PMC10783504
AbstractArticlePDF–2.4M
2.
Common Variants in PLD3 and Correlation to Amyloid-Related Phenotypes in Alzheimer’s Disease
Chong Wang, Lan Tan, Hui-Fu Wang, Wan-Jiang Yu, Ying Liu, Teng Jiang, Meng-Shan Tan, Xiao-Ke Hao, Dao-Qiang Zhang, Jin-Tai Yu, Alzheimer’s Disease Neuroimaging Initiative
J Alzheimers Dis. Author manuscript; available in PMC 2018 Dec 31.
Published in final edited form as: J Alzheimers Dis. 2015; 46(2): 491–495. doi: 10.3233/JAD-150110
PMCID:
PMC6312181
AbstractArticlePDF–397K
3.
PLD3 epigenetic changes in the hippocampus of Alzheimer’s disease
Idoia Blanco-Luquin, Miren Altuna, Javier Sánchez-Ruiz de Gordoa, Amaya Urdánoz-Casado, Miren Roldán, María Cámara, Victoria Zelaya, María Elena Erro, Carmen Echavarri, Maite Mendioroz
Clin Epigenetics. 2018; 10: 116. Published online 2018 Sep 12. doi: 10.1186/s13148-018-0547-3
PMCID:
PMC6134774
AbstractArticlePDF–1.3M
4.
Rare Variants in PLD3 Do Not Affect Risk for Early‐Onset Alzheimer Disease in a European Consortium Cohort
Rita Cacace, Tobi Van den Bossche, Sebastiaan Engelborghs, Nathalie Geerts, Annelies Laureys, Lubina Dillen, Caroline Graff, Håkan Thonberg, Huei‐Hsin Chiang, Pau Pastor, Sara Ortega‐Cubero, Maria A. Pastor, Janine Diehl‐Schmid, Panagiotis Alexopoulos, Luisa Benussi, Roberta Ghidoni, Giuliano Binetti, Benedetta Nacmias, Sandro Sorbi, Raquel Sanchez‐Valle, Albert Lladó, Ellen Gelpi, Maria Rosário Almeida, Isabel Santana, Magda Tsolaki, Maria Koutroumani, Jordi Clarimon, Alberto Lleó, Juan Fortea, Alexandre de Mendonça, Madalena Martins, Barbara Borroni, Alessandro Padovani, Radoslav Matej, Zdenek Rohan, Mathieu Vandenbulcke, Rik Vandenberghe, Peter P. De Deyn, Patrick Cras, Julie van der Zee, Kristel Sleegers, Christine Van Broeckhoven, on behalf of the Belgium Neurology (BELNEU) Consortium and the European Early‐Onset Dementia (EU EOD) Consortium
Hum Mutat. 2015 Dec; 36(12): 1226–1235. Published online 2015 Oct 14. doi: 10.1002/humu.22908
PMCID:
PMC5057316
AbstractArticlePDF–498K
5.
PLD3 is a neuronal lysosomal phospholipase D associated with β-amyloid plaques and cognitive function in Alzheimer’s disease
Alex G. Nackenoff, Timothy J. Hohman, Sarah M. Neuner, Carolyn S. Akers, Nicole C. Weitzel, Alena Shostak, Shawn M. Ferguson, Bret Mobley, David A. Bennett, Julie A. Schneider, Angela L. Jefferson, Catherine C. Kaczorowski, Matthew S. Schrag
PLoS Genet. 2021 Apr; 17(4): e1009406. Published online 2021 Apr 8. doi: 10.1371/journal.pgen.1009406
PMCID:
PMC8031396
AbstractArticlePDF–2.4M
6.
Rare coding variants in Phospholipase D3 (PLD3) confer risk for Alzheimer's disease
Carlos Cruchaga, Celeste M. Karch, Sheng Chih Jin, Bruno A. Benitez, Yefei Cai, Rita Guerreiro, Oscar Harari, Joanne Norton, John Budde, Sarah Bertelsen, Amanda T. Jeng, Breanna Cooper, Tara Skorupa, David Carrell, Denise Levitch, Simon Hsu, Jiyoon Choi, Mina Ryten, Celeste Sassi, Jose Bras, Raphael J. Gibbs, Dena G. Hernandez, Michelle K. Lupton, John Powell, Paola Forabosco, Perry G. Ridge, Christopher D. Corcoran, JoAnn T. Tschanz, Maria C. Norton, Ronald G. Munger, Cameron Schmutz, Maegan Leary, F. Yesim Demirci, Mikhil N. Bamne, Xingbin Wang, Oscar L. Lopez, Mary Ganguli, Christopher Medway, James Turton, Jenny Lord, Anne Braae, Imelda Barber, Kristelle Brown, The Alzheimer's Research UK (ARUK) Consortium, Pau Pastor, Oswaldo Lorenzo-Betancor, Zoran Brkanac, Erick Scott, Eric Topol, Kevin Morgan, Ekaterina Rogaeva, Andy Singleton, John Hardy, M. Ilyas Kamboh, Peter St George-Hyslop, Nigel Cairns, John C. Morris, John S.K. Kauwe, Alison M. Goate
Nature. Author manuscript; available in PMC 2014 Jul 23.
Published in final edited form as: Nature. 2014 Jan 23; 505(7484): 550–554. Published online 2013 Dec 11. doi: 10.1038/nature12825
PMCID:
PMC4050701
AbstractArticlePDF–1.1M
7.
Sustained Receptor Stimulation Leads to Sequestration of Recycling Endosomes in a Classical Protein Kinase C- and Phospholipase D-dependent Manner
Jolanta Idkowiak-Baldys, Aleksander Baldys, John R. Raymond, Yusuf A. Hannun
J Biol Chem. 2009 Aug 14; 284(33): 22322–22331. Published online 2009 Jun 11. doi: 10.1074/jbc.M109.026765
PMCID:
PMC2755955
AbstractArticlePDF–3.3M
8.
PLD3 and spinocerebellar ataxia
Adriana Carolina Gonzalez, Stijn Stroobants, Pia Reisdorf, Amanda Lee Gavin, David Nemazee, Dominik Schwudke, Rudi D'Hooge, Paul Saftig, Markus Damme
Brain. 2018 Nov; 141(11): e78. Published online 2018 Oct 11. doi: 10.1093/brain/awy258
PMCID:
PMC6202572
ArticlePDF–897K
9.
Analysis of novel endosome-to-Golgi retrieval genes reveals a role for PLD3 in regulating endosomal protein sorting and amyloid precursor protein processing
Aamir S. Mukadam, Sophia Y. Breusegem, Matthew N. J. Seaman
Cell Mol Life Sci. 2018 Jul; 75(14): 2613–2625. Published online 2018 Jan 24. doi: 10.1007/s00018-018-2752-9
PMCID:
PMC6003983
AbstractArticlePDF–4.2M
10.
A Role for Phospholipase D3 in Myotube Formation
Mary Osisami, Wahida Ali, Michael A. Frohman
PLoS One. 2012; 7(3): e33341. Published online 2012 Mar 12. doi: 10.1371/journal.pone.0033341
PMCID:
PMC3299777
AbstractArticlePDF–5.0M
11.
ARRDC1 and ARRDC3 act as tumor suppressors in renal cell carcinoma by facilitating YAP1 degradation
Jiantao xiao, Qing Shi, Weiguo Li, Xingyu Mu, Jintao Peng, Mingzi Li, Mulin Chen, Huabing Huang, Chenji Wang, Kun Gao, Jie Fan
Am J Cancer Res. 2018; 8(1): 132–143. Published online 2018 Jan 1.
PMCID:
PMC5794727
AbstractArticlePDF–1.4M
12.
Proteomic analysis reveals Hrs UIM-mediated ubiquitin signaling in multiple cellular processes
Julia W. Pridgeon, Elizabeth A. Webber, Di Sha, Lian Li, Lih-Shen Chin
FEBS J. Author manuscript; available in PMC 2010 Jan 1.
Published in final edited form as: FEBS J. 2009 Jan; 276(1): 118–131. doi: 10.1111/j.1742-4658.2008.06760.x
PMCID:
PMC2647816
AbstractArticlePDF–1.6M
13.
The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Sadek Amhaz, Batiste Boëda, Mouna Chouchène, Sabrina Colasse, Florent Dingli, Damarys Loew, Julien Henri, Céline Prunier, Laurence Levy
BMC Biol. 2023; 21: 73. Published online 2023 Apr 7. doi: 10.1186/s12915-023-01576-4
PMCID:
PMC10080908
AbstractArticlePDF–3.2M
14.
TGFβ attenuates cartilage extracellular matrix degradation via enhancing FBXO6-mediated MMP14 ubiquitination
Gangliang Wang, Shuai Chen, Ziang Xie, Shuying Shen, Wenbin Xu, Wenxiang Chen, Xiang Li, Yizheng Wu, Liangping Li, Bin Liu, Xianjun Ding, An Qin, Shunwu Fan
Ann Rheum Dis. 2020 Aug; 79(8): 1111–1120. Published online 2020 May 14. doi: 10.1136/annrheumdis-2019-216911
PMCID:
PMC7392491
AbstractArticlePDF–14M
15.
Phosphorylation switches protein disulfide isomerase activity to maintain proteostasis and attenuate ER stress
Jiaojiao Yu, Tao Li, Yu Liu, Xi Wang, Jianchao Zhang, Xi'e Wang, Guizhi Shi, Jizhong Lou, Likun Wang, Chih‐chen Wang, Lei Wang
EMBO J. 2020 May 18; 39(10): e103841. Published online 2020 Mar 9. doi: 10.15252/embj.2019103841
PMCID:
PMC7232009
AbstractArticlePDF–5.5M
16.
HIV–host interactome revealed directly from infected cells
Yang Luo, Erica Y. Jacobs, Todd M. Greco, Kevin D. Mohammed, Tommy Tong, Sarah Keegan, James M. Binley, Ileana M. Cristea, David Fenyö, Michael P. Rout, Brian T. Chait, Mark A. Muesing
Nat Microbiol. Author manuscript; available in PMC 2016 Jul 1.
Published in final edited form as: Nat Microbiol. 2016 Jul; 1(7): 16068. Published online 2016 May 23. doi: 10.1038/nmicrobiol.2016.68
PMCID:
PMC4928716
AbstractArticlePDF–1.1M
17.
A Comprehensive Resource of Interacting Protein Regions for Refining Human Transcription Factor Networks
Etsuko Miyamoto-Sato, Shigeo Fujimori, Masamichi Ishizaka, Naoya Hirai, Kazuyo Masuoka, Rintaro Saito, Yosuke Ozawa, Katsuya Hino, Takanori Washio, Masaru Tomita, Tatsuhiro Yamashita, Tomohiro Oshikubo, Hidetoshi Akasaka, Jun Sugiyama, Yasuo Matsumoto, Hiroshi Yanagawa
PLoS One. 2010; 5(2): e9289. Published online 2010 Feb 24. doi: 10.1371/journal.pone.0009289
PMCID:
PMC2827538
AbstractArticlePDF–676K
18.
IKK-mediated Regulation of the COP9 Signalosome via Phosphorylation of CSN5
Jingzi Zhang, Ruoyu Zhao, Christine L. N. Bryant, Kenneth Wu, Zhihong Liu, Yibing Ding, Yue Zhao, Bin Xue, Zhen-Qiang Pan, Chaojun Li, Lan Huang, Lei Fang
J Proteome Res. Author manuscript; available in PMC 2020 Jun 17.
Published in final edited form as: J Proteome Res. 2020 Mar 6; 19(3): 1119–1130. Published online 2020 Feb 3. doi: 10.1021/acs.jproteome.9b00626
PMCID:
PMC7299130
AbstractArticlePDF–2.2M
19.
Interactome Analysis of Human Phospholipase D and Phosphatidic Acid-Associated Protein Network
Rebecca Elizabeth Kattan, Han Han, Gayoung Seo, Bing Yang, Yongqi Lin, Max Dotson, Stephanie Pham, Yahya Menely, Wenqi Wang
Mol Cell Proteomics. 2022 Feb; 21(2): 100195. Published online 2022 Jan 8. doi: 10.1016/j.mcpro.2022.100195
PMCID:
PMC8864472
AbstractArticlePDF–3.6M
20.
Comparative Host Interactomes of the SARS-CoV-2 Nonstructural Protein 3 and Human Coronavirus Homologs
Katherine M. Almasy, Jonathan P. Davies, Lars Plate
Mol Cell Proteomics. 2021; 20: 100120. Published online 2021 Jun 27. doi: 10.1016/j.mcpro.2021.100120
PMCID:
PMC8236078
AbstractArticlePDF–4.6M

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