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Select item 70939631.

DDX39B interacts with the pattern recognition receptor pathway to inhibit NF-κB and sensitize to alkylating chemotherapy

Szymon J. Szymura, Giovanna M. Bernal, Longtao Wu, Zhongqin Zhang, Clayton D. Crawley, David J. Voce, Paige-Ashley Campbell, Diana E. Ranoa, Ralph R. Weichselbaum, Bakhtiar Yamini

BMC Biol. 2020; 18: 32. Published online 2020 Mar 24. doi: 10.1186/s12915-020-0764-z

PMCID:: PMC7093963

Abstract Article PDF–3.2M

Select item 39701432.

Murine Leukemia Virus Uses TREX Components for Efficient Nuclear Export of Unspliced Viral Transcripts

Toshie Sakuma, Jason M. Tonne, Yasuhiro Ikeda

Viruses. 2014 Mar; 6(3): 1135–1148. Published online 2014 Mar 10. doi: 10.3390/v6031135

PMCID:: PMC3970143

Abstract Article PDF–460K

Select item 60455403.

Heat shock factor 4 regulates the expression of HSP25 and alpha B-crystallin by associating with DEXD/H-box RNA helicase UAP56

Xiukun Cui, Wenxiu Han, Jing Li, Riping Feng, Zheng Zhou, JiuLi Han, Mengyuan Li, Shuangfeng Wang, Wanting Zhang, Qin Lei, Jun Zhang, Yutiao Liu, Yanzhong Hu

Cell Stress Chaperones. 2018 Jul; 23(4): 571–579. Published online 2017 Nov 21. doi: 10.1007/s12192-017-0865-y

PMCID:: PMC6045540

Abstract Article PDF–4.7M

Select item 31863624.

Interferon-induced Antiviral Protein MxA Interacts with the Cellular RNA Helicases UAP56 and URH49

Christian Wisskirchen, Thomas H. Ludersdorfer, Dominik A. Müller, Eva Moritz, Jovan Pavlovic

J Biol Chem. 2011 Oct 7; 286(40): 34743–34751. Published online 2011 Aug 22. doi: 10.1074/jbc.M111.251843

PMCID:: PMC3186362

Abstract Article PDF–2.5M

Select item 108532165.

Compromised transcription-mRNA export factor THOC2 causes R-loop accumulation, DNA damage and adverse neurodevelopment

Rudrarup Bhattacharjee, Lachlan A. Jolly, Mark A. Corbett, Ing Chee Wee, Sushma R. Rao, Alison E. Gardner, Tarin Ritchie, Eline J. H. van Hugte, Ummi Ciptasari, Sandra Piltz, Jacqueline E. Noll, Nazzmer Nazri, Clare L. van Eyk, Melissa White, Dani Fornarino, Cathryn Poulton, Gareth Baynam, Lyndsey E. Collins-Praino, Marten F. Snel, Nael Nadif Kasri, Kim M. Hemsley, Paul Q. Thomas, Raman Kumar, Jozef Gecz

Nat Commun. 2024; 15: 1210. Published online 2024 Feb 8. doi: 10.1038/s41467-024-45121-5

PMCID:: PMC10853216

Abstract Article PDF–11M

Select item 42556926.

Formation of nuclear bodies by the lncRNA Gomafu-associating proteins Celf3 and SF1

Akira Ishizuka, Yuko Hasegawa, Kentaro Ishida, Kaori Yanaka, Shinichi Nakagawa

Genes Cells. 2014 Sep; 19(9): 704–721. Published online 2014 Aug 21. doi: 10.1111/gtc.12169

PMCID:: PMC4255692

Abstract Article PDF–5.4M

Select item 30270557.

Identification of differential protein interactors of lamin A and progerin

Nard Kubben, Jan Willem Voncken, Jeroen Demmers, Chantal Calis, Geert van Almen, Yigal Pinto, Tom Misteli

Nucleus. 2010 Nov-Dec; 1(6): 513–525. Published online 2010 Sep 3. doi: 10.4161/nucl.1.6.13512

PMCID:: PMC3027055

Abstract Article PDF–10M

Select item 4038048.

Analysis of the Gene-Dense Major Histocompatibility Complex Class III Region and Its Comparison to Mouse

Tao Xie, Lee Rowen, Begoña Aguado, Mary Ellen Ahearn, Anup Madan, Shizhen Qin, R. Duncan Campbell, Leroy Hood

Genome Res. 2003 Dec; 13(12): 2621–2636. doi: 10.1101/gr.1736803

PMCID:: PMC403804

Abstract Article PDF–901K

Select item 37682249.

Affinity Purification Strategies for Proteomic Analysis of Transcription Factor Complexes

Roberto Giambruno, Florian Grebien, Alexey Stukalov, Christian Knoll, Melanie Planyavsky, Elena L. Rudashevskaya, Jacques Colinge, Giulio Superti-Furga, Keiryn L. Bennett

J Proteome Res. 2013 Sep 6; 12(9): 4018–4027. Published online 2013 Aug 12. doi: 10.1021/pr4003323

PMCID:: PMC3768224

Abstract Article PDF–4.0M

Select item 455775310.

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis

Michal Mikula, Tymon Rubel, Jakub Karczmarski, Malgorzata Statkiewicz, Karol Bomsztyk, Jerzy Ostrowski

Proteome Sci. 2015; 13: 23. Published online 2015 Sep 2. doi: 10.1186/s12953-015-0079-0

PMCID:: PMC4557753

Abstract Article PDF–1.5M

Select item 30068411.

Transcriptome Analysis of Mouse Stem Cells and Early Embryos

Alexei A Sharov, Yulan Piao, Ryo Matoba, Dawood B Dudekula, Yong Qian, Vincent VanBuren, Geppino Falco, Patrick R Martin, Carole A Stagg, Uwem C Bassey, Yuxia Wang, Mark G Carter, Toshio Hamatani, Kazuhiro Aiba, Hidenori Akutsu, Lioudmila Sharova, Tetsuya S Tanaka, Wendy L Kimber, Toshiyuki Yoshikawa, Saied A Jaradat, Serafino Pantano, Ramaiah Nagaraja, Kenneth R Boheler, Dennis Taub, Richard J Hodes, Dan L Longo, David Schlessinger, Jonathan Keller, Emily Klotz, Garnett Kelsoe, Akihiro Umezawa, Angelo L Vescovi, Janet Rossant, Tilo Kunath, Brigid L. M Hogan, Anna Curci, Michele D'Urso, Janet Kelso, Winston Hide, Minoru S. H Ko

PLoS Biol. 2003 Dec; 1(3): e74. Published online 2003 Dec 22. doi: 10.1371/journal.pbio.0000074

PMCID:: PMC300684

Abstract Article PDF–572K

Select item 529099012.

Widespread and dynamic translational control of red blood cell development

Juan R. Alvarez-Dominguez, Xu Zhang, Wenqian Hu

Blood. 2017 Feb 2; 129(5): 619–629. Prepublished online 2016 Nov 29. doi: 10.1182/blood-2016-09-741835

PMCID:: PMC5290990

Abstract Article

Select item 960386013.

The Deubiquitinating Enzyme USP48 Interacts with the Retinal Degeneration-Associated Proteins UNC119a and ARL3

Laura Sánchez-Bellver, Andrea Férriz-Gordillo, Marc Carrillo-Pz, Laura Rabanal, Francesc R. Garcia-Gonzalo, Gemma Marfany

Int J Mol Sci. 2022 Oct; 23(20): 12527. Published online 2022 Oct 19. doi: 10.3390/ijms232012527

PMCID:: PMC9603860

Abstract Article PDF–3.4M

Select item 633346014.

ATG5 is required for B cell polarization and presentation of particulate antigens

Florent Arbogast, Johan Arnold, Philippe Hammann, Lauriane Kuhn, Johana Chicher, Diane Murera, Justine Weishaar, Sylviane Muller, Jean-Daniel Fauny, Frédéric Gros

Autophagy. 2019; 15(2): 280–294. Published online 2018 Sep 22. doi: 10.1080/15548627.2018.1516327

PMCID:: PMC6333460

Abstract Article PDF–2.7M

Select item 1030785215.

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility

Juan Gu, Pingyang Ke, Haokun Guo, Jing Liu, Yan Liu, Xin Tian, Zhuo Huang, Xin Xu, Demei Xu, Yuanlin Ma, Xuefeng Wang, Fei Xiao

Cell Death Differ. 2023 Jul; 30(7): 1726–1741. Published online 2023 May 4. doi: 10.1038/s41418-023-01174-5

PMCID:: PMC10307852

Abstract Article PDF–8.8M

Select item 407349416.

The Central Role of EED in the Orchestration of Polycomb Group Complexes

Qi Cao, Xiaoju Wang, Meng Zhao, Rendong Yang, Rohit Malik, Yuanyuan Qiao, Anton Poliakov, Anastasia K. Yocum, Yong Li, Wei Chen, Xuhong Cao, Xia Jiang, Arun Dahiya, Clair Harris, Felix Y. Feng, Sundeep Kalantry, Zhaohui S. Qin, Saravana M. Dhanasekaran, Arul M. Chinnaiyan

Nat Commun. Author manuscript; available in PMC 2014 Jul 24.

Published in final edited form as: Nat Commun. 2014; 5: 3127. doi: 10.1038/ncomms4127

PMCID:: PMC4073494

Abstract Article PDF–2.1M

Select item 18788517.

A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome

Jens Hansen, Thomas Floss, Petra Van Sloun, Ernst-Martin Füchtbauer, Franz Vauti, Hans-Hennig Arnold, Frank Schnütgen, Wolfgang Wurst, Harald von Melchner, Patricia Ruiz

Proc Natl Acad Sci U S A. 2003 Aug 19; 100(17): 9918–9922. Published online 2003 Aug 6. doi: 10.1073/pnas.1633296100

PMCID:: PMC187885

Abstract Article PDF–287K

Select item 16551118.

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells

Doug Stryke, Michiko Kawamoto, Conrad C. Huang, Susan J. Johns, Leslie A. King, Courtney A. Harper, Elaine C. Meng, Roy E. Lee, Alice Yee, Larry L'Italien, Pao-Tien Chuang, Stephen G. Young, William C. Skarnes, Patricia C. Babbitt, Thomas E. Ferrin

Nucleic Acids Res. 2003 Jan 1; 31(1): 278–281. doi: 10.1093/nar/gkg064

PMCID:: PMC165511

Abstract Article PDF–217K

Select item 793877019.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 255627020.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

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