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Items: 1 to 20 of 133

1.
Small extrachromosomal circular DNAs, microDNA, produce short regulatory RNAs that suppress gene expression independent of canonical promoters
Teressa Paulsen, Yoshiyuki Shibata, Pankaj Kumar, Laura Dillon, Anindya Dutta
Nucleic Acids Res. 2019 May 21; 47(9): 4586–4596. Published online 2019 Mar 4. doi: 10.1093/nar/gkz155
PMCID:
PMC6511871
AbstractArticlePDF–4.2M
2.
Intrinsic disorder drives N-terminal ubiquitination by Ube2w
Vinayak Vittal, Lei Shi, Dawn M. Wenzel, K. Matthew Scaglione, Emily D. Duncan, Venkatesha Basrur, Kojo S. J. Elenitoba-Johnson, David Baker, Henry L. Paulson, Peter S. Brzovic, Rachel E. Klevit
Nat Chem Biol. Author manuscript; available in PMC 2015 Jul 1.
Published in final edited form as: Nat Chem Biol. 2015 Jan; 11(1): 83–89. Published online 2014 Dec 1. doi: 10.1038/nchembio.1700
PMCID:
PMC4270946
AbstractArticlePDF–1.6M
3.
Six human RNA polymerase subunits functionally substitute for their yeast counterparts.
K McKune, P A Moore, M W Hull, N A Woychik
Mol Cell Biol. 1995 Dec; 15(12): 6895–6900. doi: 10.1128/mcb.15.12.6895
PMCID:
PMC230944
SummaryPDF–284K
4.
Four subunits that are shared by the three classes of RNA polymerase are functionally interchangeable between Homo sapiens and Saccharomyces cerevisiae.
G V Shpakovski, J Acker, M Wintzerith, J F Lacroix, P Thuriaux, M Vigneron
Mol Cell Biol. 1995 Sep; 15(9): 4702–4710. doi: 10.1128/mcb.15.9.4702
PMCID:
PMC230713
SummaryPDF–501K
5.
Structure of the human RNA polymerase I elongation complex
Dan Zhao, Weida Liu, Ke Chen, Zihan Wu, Huirong Yang, Yanhui Xu
Cell Discov. 2021; 7: 97. Published online 2021 Oct 20. doi: 10.1038/s41421-021-00335-5
PMCID:
PMC8528822
AbstractArticlePDF–5.8M
6.
FACT facilitates chromatin transcription by RNA polymerases I and III
Joanna L Birch, Bertrand C-M Tan, Kostya I Panov, Tatiana B Panova, Jens S Andersen, Tom A Owen-Hughes, Jackie Russell, Sheng-Chung Lee, Joost C B M Zomerdijk
EMBO J. 2009 Apr 8; 28(7): 854–865. Published online 2009 Feb 12. doi: 10.1038/emboj.2009.33
PMCID:
PMC2647773
AbstractArticlePDF–766K
7.
Human immunodeficiency virus type-1 Tat is an integral component of the activated transcription-elongation complex.
N J Keen, M J Gait, J Karn
Proc Natl Acad Sci U S A. 1996 Mar 19; 93(6): 2505–2510. doi: 10.1073/pnas.93.6.2505
PMCID:
PMC39827
SummaryPage BrowsePDF–1.6M
8.
Trans-activation by human immunodeficiency virus Tat protein requires the C-terminal domain of RNA polymerase II.
H Okamoto, C T Sheline, J L Corden, K A Jones, B M Peterlin
Proc Natl Acad Sci U S A. 1996 Oct 15; 93(21): 11575–11579. doi: 10.1073/pnas.93.21.11575
PMCID:
PMC38099
SummaryPage BrowsePDF–1.1M
9.
Transcriptional Cofactor CA150 Regulates RNA Polymerase II Elongation in a TATA-Box-Dependent Manner
Carlos Suñé, Mariano A. Garcia-Blanco
Mol Cell Biol. 1999 Jul; 19(7): 4719–4728. doi: 10.1128/mcb.19.7.4719
PMCID:
PMC84270
AbstractArticlePDF–1.1M
10.
Specific binding of RNA polymerase II to the human immunodeficiency virus trans-activating region RNA is regulated by cellular cofactors and Tat.
F Wu-Baer, D Sigman, R B Gaynor
Proc Natl Acad Sci U S A. 1995 Aug 1; 92(16): 7153–7157. doi: 10.1073/pnas.92.16.7153
PMCID:
PMC41297
SummaryPage BrowsePDF–1.5M
11.
BRCA1 interaction with RNA polymerase II reveals a role for hRPB2 and hRPB10α in activated transcription
Brian P. Schlegel, Victoria J. Green, John A. A. Ladias, Jeffrey D. Parvin
Proc Natl Acad Sci U S A. 2000 Mar 28; 97(7): 3148–3153. Published online 2000 Mar 21. doi: 10.1073/pnas.070452397
PMCID:
PMC16207
AbstractArticlePDF–257K
12.
The human RNA polymerase I structure reveals an HMG-like docking domain specific to metazoans
Julia L Daiß, Michael Pilsl, Kristina Straub, Andrea Bleckmann, Mona Höcherl, Florian B Heiss, Guillermo Abascal-Palacios, Ewan P Ramsay, Katarina Tlučková, Jean-Clement Mars, Torben Fürtges, Astrid Bruckmann, Till Rudack, Carrie Bernecky, Valérie Lamour, Konstantin Panov, Alessandro Vannini, Tom Moss, Christoph Engel
Life Sci Alliance. 2022 Nov; 5(11): e202201568. Published online 2022 Sep 1. doi: 10.26508/lsa.202201568
PMCID:
PMC9438803
AbstractArticlePDF–3.0M
13.
Identification of Novel Inhibitors of Human Immunodeficiency Virus Type 1 Replication by In Silico Screening Targeting Cyclin T1/Tat Interaction
Takayuki Hamasaki, Mika Okamoto, Masanori Baba
Antimicrob Agents Chemother. 2013 Mar; 57(3): 1323–1331. doi: 10.1128/AAC.01711-12
PMCID:
PMC3591921
AbstractArticlePDF–2.2M
14.
Control of HIV Latency by Epigenetic and Non-Epigenetic Mechanisms
Uri Mbonye, Jonathan Karn
Curr HIV Res. 2011 Dec; 9(8): 554–567. Published online 2011 Dec. doi: 10.2174/157016211798998736
PMCID:
PMC3319922
AbstractArticlePDF–855K
15.
TIP30 has an intrinsic kinase activity required for up-regulation of a subset of apoptotic genes
Hua Xiao, Vikas Palhan, Yili Yang, Robert G. Roeder
EMBO J. 2000 Mar 1; 19(5): 956–963. doi: 10.1093/emboj/19.5.956
PMCID:
PMC305635
AbstractArticlePDF–501K
16.
The human immunodeficiency virus Tat proteins specifically associate with TAK in vivo and require the carboxyl-terminal domain of RNA polymerase II for function.
X Yang, C H Herrmann, A P Rice
J Virol. 1996 Jul; 70(7): 4576–4584. doi: 10.1128/jvi.70.7.4576-4584.1996
PMCID:
PMC190394
SummaryPDF–627K
17.
Lentivirus Tat proteins specifically associate with a cellular protein kinase, TAK, that hyperphosphorylates the carboxyl-terminal domain of the large subunit of RNA polymerase II: candidate for a Tat cofactor.
C H Herrmann, A P Rice
J Virol. 1995 Mar; 69(3): 1612–1620. doi: 10.1128/jvi.69.3.1612-1620.1995
PMCID:
PMC188757
SummaryPDF–325K
18.
Human and Rodent Transcription Elongation Factor P-TEFb: Interactions with Human Immunodeficiency Virus Type 1 Tat and Carboxy-Terminal Domain Substrate
Y. Ramanathan, Syed M. Reza, Tara M. Young, Michael B. Mathews, Tsafi Pe’ery
J Virol. 1999 Jul; 73(7): 5448–5458. doi: 10.1128/jvi.73.7.5448-5458.1999
PMCID:
PMC112601
AbstractArticlePDF–1.0M
19.
The Ability of Positive Transcription Elongation Factor b To Transactivate Human Immunodeficiency Virus Transcription Depends on a Functional Kinase Domain, Cyclin T1, and Tat
Koh Fujinaga, Thomas P. Cujec, Junmin Peng, Judit Garriga, David H. Price, Xavier Graña, B. Matija Peterlin
J Virol. 1998 Sep; 72(9): 7154–7159. doi: 10.1128/jvi.72.9.7154-7159.1998
PMCID:
PMC109937
AbstractArticlePDF–265K
20.
Tip110 Protein Binds to Unphosphorylated RNA Polymerase II and Promotes Its Phosphorylation and HIV-1 Long Terminal Repeat Transcription
Weina Zhao, Ying Liu, Khalid Amine Timani, Johnny J. He
J Biol Chem. 2014 Jan 3; 289(1): 190–202. Published online 2013 Nov 11. doi: 10.1074/jbc.M113.529784
PMCID:
PMC3879543
AbstractArticlePDF–2.1M

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