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Items: 1 to 20 of 22

1.
Boris knockout eliminates AOM/DSS‐induced in situ colorectal cancer by suppressing DNA damage repair and inflammation
Bo‐Wen Zuo, Wan‐Xin Yao, Meng‐Die Fang, Juan Ren, Ling‐Lan Tu, Run‐Jie Fan, Yan‐Mei Zhang
Cancer Sci. 2023 May; 114(5): 1972–1985. Published online 2023 Feb 5. doi: 10.1111/cas.15732
PMCID:
PMC10154901
AbstractArticlePDF–18M
2.
The combined action of CTCF and its testis-specific paralog BORIS is essential for spermatogenesis
Samuel Rivero-Hinojosa, Elena M. Pugacheva, Sungyun Kang, Claudia Fabiola Méndez-Catalá, Alexander L. Kovalchuk, Alexander V. Strunnikov, Dmitri Loukinov, Jeannie T. Lee, Victor V. Lobanenkov
Nat Commun. 2021; 12: 3846. Published online 2021 Jun 22. doi: 10.1038/s41467-021-24140-6
PMCID:
PMC8219828
AbstractArticlePDF–4.7M
3.
Testis-specific transcriptional regulators selectively occupy BORIS-bound CTCF target regions in mouse male germ cells
Samuel Rivero-Hinojosa, Sungyun Kang, Victor V. Lobanenkov, Gabriel E. Zentner
Sci Rep. 2017; 7: 41279. Published online 2017 Feb 1. doi: 10.1038/srep41279
Correction in:
Sci Rep. 2017; 7: 46891.
PMCID:
PMC5286509
AbstractArticlePDF–1.7M
4.
Expression of the CTCFL Gene during Mouse Embryogenesis Causes Growth Retardation, Postnatal Lethality, and Dysregulation of the Transforming Growth Factor β Pathway
Leyla Sati, Caroline Zeiss, Krishna Yekkala, Ramazan Demir, James McGrath
Mol Cell Biol. 2015 Oct; 35(19): 3436–3445. Prepublished online 2015 Jul 13. Published online 2015 Sep 4. doi: 10.1128/MCB.00381-15
PMCID:
PMC4561735
AbstractArticlePDF–3.0M
5.
The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner
Frank Sleutels, Widia Soochit, Marek Bartkuhn, Helen Heath, Sven Dienstbach, Philipp Bergmaier, Vedran Franke, Manuel Rosa-Garrido, Suzanne van de Nobelen, Lisa Caesar, Michael van der Reijden, Jan Christian Bryne, Wilfred van IJcken, J Anton Grootegoed, M Dolores Delgado, Boris Lenhard, Rainer Renkawitz, Frank Grosveld, Niels Galjart
Epigenetics Chromatin. 2012; 5: 8. Published online 2012 Jun 18. doi: 10.1186/1756-8935-5-8
PMCID:
PMC3418201
AbstractArticlePDF–1.5M
6.
A Cell Cycle Role for the Epigenetic Factor CTCF-L/BORIS
Manuel Rosa-Garrido, Laura Ceballos, Pilar Alonso-Lecue, Cristina Abraira, M. Dolores Delgado, Alberto Gandarillas
PLoS One. 2012; 7(6): e39371. Published online 2012 Jun 19. doi: 10.1371/journal.pone.0039371
PMCID:
PMC3378572
AbstractArticlePDF–7.5M
7.
Transcription Factor BORIS (Brother of the Regulator of Imprinted Sites) Directly Induces Expression of a Cancer-Testis Antigen, TSP50, through Regulated Binding of BORIS to the Promoter
Natsuki Kosaka-Suzuki, Teruhiko Suzuki, Elena M. Pugacheva, Alexander A. Vostrov, Herbert C. Morse, III, Dmitri Loukinov, Victor Lobanenkov
J Biol Chem. 2011 Aug 5; 286(31): 27378–27388. Published online 2011 Jun 9. doi: 10.1074/jbc.M111.243576
PMCID:
PMC3149331
AbstractArticlePDF–2.4M
8.
Widespread Expression of BORIS/CTCFL in Normal and Cancer Cells
Tania A. Jones, Babatunji W. Ogunkolade, Jaroslaw Szary, Johan Aarum, Muhammad A. Mumin, Shyam Patel, Christopher A. Pieri, Denise Sheer
PLoS One. 2011; 6(7): e22399. Published online 2011 Jul 19. doi: 10.1371/journal.pone.0022399
PMCID:
PMC3139640
AbstractArticlePDF–2.0M
9.
Expression of a Testis-Specific Form of Gal3st1 (CST), a Gene Essential for Spermatogenesis, Is Regulated by the CTCF Paralogous Gene BORIS
Teruhiko Suzuki, Natsuki Kosaka-Suzuki, Svetlana Pack, Dong-Mi Shin, Jeongheon Yoon, Ziedulla Abdullaev, Elena Pugacheva, Herbert C. Morse, III, Dmitri Loukinov, Victor Lobanenkov
Mol Cell Biol. 2010 May; 30(10): 2473–2484. Published online 2010 Mar 15. doi: 10.1128/MCB.01093-09
PMCID:
PMC2863697
AbstractArticlePDF–2.2M
10.
Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation
Mayilaadumveettil Nishana, Caryn Ha, Javier Rodriguez-Hernaez, Ali Ranjbaran, Erica Chio, Elphege P. Nora, Sana B. Badri, Andreas Kloetgen, Benoit G. Bruneau, Aristotelis Tsirigos, Jane A. Skok
Genome Biol. 2020; 21: 108. Published online 2020 May 11. doi: 10.1186/s13059-020-02024-0
Correction in:
Genome Biol. 2020; 21: 133.
PMCID:
PMC7212617
AbstractArticlePDF–4.8M
11.
CTCFL/BORIS Is a Methylation-Independent DNA-Binding Protein That Preferentially Binds to the Paternal H19 Differentially Methylated Region
Phuongmai Nguyen, Hengmi Cui, Kheem S. Bisht, Lunching Sun, Krish Patel, Richard S. Lee, Hiroyuki Kugoh, Mitsuo Oshimura, Andrew P. Feinberg, David Gius
Cancer Res. Author manuscript; available in PMC 2009 Aug 25.
Published in final edited form as: Cancer Res. 2008 Jul 15; 68(14): 5546–5551. doi: 10.1158/0008-5472.CAN-08-1005
PMCID:
PMC2731476
AbstractArticlePDF–782K
12.
BORIS, a novel male germ-line-specific protein associated with epigenetic reprogramming events, shares the same 11-zinc-finger domain with CTCF, the insulator protein involved in reading imprinting marks in the soma
Dmitri I. Loukinov, Elena Pugacheva, Sergei Vatolin, Svetlana D. Pack, Hanlim Moon, Igor Chernukhin, Poonam Mannan, Erik Larsson, Chandrasekhar Kanduri, Alexander A. Vostrov, Hengmi Cui, Emily L. Niemitz, John E. J. Rasko, France M. Docquier, Malathi Kistler, Joseph J. Breen, Zhengping Zhuang, Wolfgang W. Quitschke, Rainer Renkawitz, Elena M. Klenova, Andrew P. Feinberg, Rolf Ohlsson, Herbert C. Morse, III, Victor V. Lobanenkov
Proc Natl Acad Sci U S A. 2002 May 14; 99(10): 6806–6811. doi: 10.1073/pnas.092123699
PMCID:
PMC124484
AbstractArticlePDF–695K
13.
BAT3 and SET1A Form a Complex with CTCFL/BORIS To Modulate H3K4 Histone Dimethylation and Gene Expression
Phuongmai Nguyen, Gil Bar-Sela, Lunching Sun, Kheem S. Bisht, Hengmi Cui, Elise Kohn, Andrew P. Feinberg, David Gius
Mol Cell Biol. 2008 Nov; 28(21): 6720–6729. Published online 2008 Sep 2. doi: 10.1128/MCB.00568-08
PMCID:
PMC2573239
AbstractArticlePDF–1.2M
14.
CTCF regulates the local epigenetic state of ribosomal DNA repeats
Suzanne van de Nobelen, Manuel Rosa-Garrido, Joerg Leers, Helen Heath, Widia Soochit, Linda Joosen, Iris Jonkers, Jeroen Demmers, Michael van der Reijden, Verónica Torrano, Frank Grosveld, M Dolores Delgado, Rainer Renkawitz, Niels Galjart, Frank Sleutels
Epigenetics Chromatin. 2010; 3: 19. Published online 2010 Nov 8. doi: 10.1186/1756-8935-3-19
PMCID:
PMC2993708
AbstractArticlePDF–2.3M
15.
The Testis-Specific Factor CTCFL Cooperates with the Protein Methyltransferase PRMT7 in H19 Imprinting Control Region Methylation
Petar Jelinic, Jean-Christophe Stehle, Phillip Shaw
PLoS Biol. 2006 Nov; 4(11): e355. Published online 2006 Oct 17. doi: 10.1371/journal.pbio.0040355
PMCID:
PMC1609128
AbstractArticlePDF–712K
16.
GenePaint.org: an atlas of gene expression patterns in the mouse embryo
Axel Visel, Christina Thaller, Gregor Eichele
Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029
PMCID:
PMC308763
AbstractArticlePDF–253K
17.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
18.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
19.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
20.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K

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