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Select item 108282001.

E3 ligases MAC3A and MAC3B ubiquitinate UBIQUITIN-SPECIFIC PROTEASE14 to regulate organ size in Arabidopsis

Xiaopeng Guo, Xin Zhang, Shan Jiang, Xin Qiao, Bolun Meng, Xiaohang Wang, Yanan Wang, Kaihuan Yang, Yilan Zhang, Na Li, Tianyan Chen, Yiyang Kang, Mengyi Yao, Xuan Zhang, Xinru Wang, Erling Zhang, Junhua Li, Dawei Yan, Zhubing Hu, José Ramón Botella, Chun-Peng Song, Yunhai Li, Siyi Guo

Plant Physiol. 2024 Feb; 194(2): 684–697. Published online 2023 Oct 18. doi: 10.1093/plphys/kiad559

PMCID:: PMC10828200

Abstract Article PDF–5.5M

Select item 11701182.

In vivo disassembly of free polyubiquitin chains by yeast Ubp14 modulates rates of protein degradation by the proteasome.

Amerik AYu, S Swaminathan, B A Krantz, K D Wilkinson, M Hochstrasser

EMBO J. 1997 Aug 15; 16(16): 4826–4838. doi: 10.1093/emboj/16.16.4826

PMCID:: PMC1170118

Summary PDF–982K

Select item 30807903.

The loop-less ^tmCdc34 E2 mutant defective in polyubiquitination in vitro and in vivo supports yeast growth in a manner dependent on Ubp14 and Cka2

Agnieszka Lass, Ross Cocklin, Kenneth M Scaglione, Michael Skowyra, Sergey Korolev, Mark Goebl, Dorota Skowyra

Cell Div. 2011; 6: 7. Published online 2011 Mar 31. doi: 10.1186/1747-1028-6-7

Correction in:: Cell Div. 2016; 11: 13.

PMCID:: PMC3080790

Abstract Article PDF–6.7M

Select item 48023584.

Multiplexed, Proteome-Wide Protein Expression Profiling: Yeast Deubiquitylating Enzyme Knockout Strains

Marta Isasa, Christopher M. Rose, Suzanne Elsasser, José Navarrete-Perea, Joao A. Paulo, Daniel J. Finley, Steven P. Gygi

J Proteome Res. Author manuscript; available in PMC 2016 Mar 22.

Published in final edited form as: J Proteome Res. 2015 Dec 4; 14(12): 5306–5317. Published online 2015 Nov 4. doi: 10.1021/acs.jproteome.5b00802

PMCID:: PMC4802358

Abstract Article PDF–1.3M

Select item 71151065.

Ubiquitin Linkage Specificity of Deubiquitinases Determines Cyclophilin Nuclear Localization and Degradation

Yanchang Li, Qiuyan Lan, Yuan Gao, Cong Xu, Zhongwei Xu, Yihao Wang, Lei Chang, Junzhu Wu, Zixin Deng, Fuchu He, Daniel Finley, Ping Xu

iScience. 2020 Apr 24; 23(4): 100984. Published online 2020 Mar 13. doi: 10.1016/j.isci.2020.100984

PMCID:: PMC7115106

Abstract Article PDF–5.7M

Select item 98945556.

Yeast derlin Dfm1 employs a chaperone-like function to resolve misfolded membrane protein stress

Rachel Kandel, Jasmine Jung, Della Syau, Tiffany Kuo, Livia Songster, Casey Horn, Claire Chapman, Analine Aguayo, Sascha Duttke, Christopher Benner, Sonya E. Neal

PLoS Biol. 2023 Jan; 21(1): e3001950. Published online 2023 Jan 23. doi: 10.1371/journal.pbio.3001950

PMCID:: PMC9894555

Abstract Article PDF–3.3M

Select item 1531297.

Catabolite Degradation of Fructose-1,6-bisphosphatase in the Yeast Saccharomyces cerevisiae: A Genome-wide Screen Identifies Eight Novel GID Genes and Indicates the Existence of Two Degradation Pathways

Jochen Regelmann, Thomas Schüle, Frank S. Josupeit, Jaroslav Horak, Matthias Rose, Karl-Dieter Entian, Michael Thumm, Dieter H. Wolf

Mol Biol Cell. 2003 Apr; 14(4): 1652–1663. doi: 10.1091/mbc.E02-08-0456

PMCID:: PMC153129

Abstract Article PDF–509K

Select item 80275678.

Deubiquitinase Ubp3 enhances the proteasomal degradation of key enzymes in sterol homeostasis

Qiuyan Lan, Yanchang Li, Fuqiang Wang, Zhaodi Li, Yuan Gao, Hui Lu, Yihao Wang, Zhenwen Zhao, Zixin Deng, Fuchu He, Junzhu Wu, Ping Xu

J Biol Chem. 2021 Jan-Jun; 296: 100348. Published online 2021 Jan 29. doi: 10.1016/j.jbc.2021.100348

PMCID:: PMC8027567

Abstract Article PDF–3.5M

Select item 62498629.

A balance of deubiquitinating enzymes controls cell cycle entry

Claudine E. Mapa, Heather E. Arsenault, Michelle M. Conti, Kristin E. Poti, Jennifer A. Benanti

Mol Biol Cell. 2018 Nov 15; 29(23): 2821–2834. doi: 10.1091/mbc.E18-07-0425

PMCID:: PMC6249862

Abstract Article PDF–3.9M

Select item 470260510.

The Catalytic Activity of the Ubp3 Deubiquitinating Protease Is Required for Efficient Stress Granule Assembly in Saccharomyces cerevisiae

Regina Nostramo, Sapna N. Varia, Bo Zhang, Megan M. Emerson, Paul K. Herman

Mol Cell Biol. 2016 Jan 1; 36(1): 173–183. Prepublished online 2015 Oct 26. Published online 2015 Dec 18. doi: 10.1128/MCB.00609-15

PMCID:: PMC4702605

Abstract Article PDF–2.3M

Select item 324799111.

Protein-linked Ubiquitin Chain Structure Restricts Activity of Deubiquitinating Enzymes

Jonathan B. Schaefer, David O. Morgan

J Biol Chem. 2011 Dec 30; 286(52): 45186–45196. Published online 2011 Nov 9. doi: 10.1074/jbc.M111.310094

PMCID:: PMC3247991

Abstract Article PDF–5.8M

Select item 290632812.

The TOR Complex 1 Is Distributed in Endosomes and in Retrograde Vesicles That Form from the Vacuole Membrane and Plays an Important Role in the Vacuole Import and Degradation Pathway

C. Randell Brown, Guo-Chiuan Hung, Danielle Dunton, Hui-Ling Chiang

J Biol Chem. 2010 Jul 23; 285(30): 23359–23370. Published online 2010 May 10. doi: 10.1074/jbc.M109.075143

PMCID:: PMC2906328

Abstract Article PDF–3.0M

Select item 148910313.

Role of Doa1 in the Saccharomyces cerevisiae DNA Damage Response

Ewa T. Lis, Floyd E. Romesberg

Mol Cell Biol. 2006 Jun; 26(11): 4122–4133. doi: 10.1128/MCB.01640-05

PMCID:: PMC1489103

Abstract Article PDF–675K

Select item 365673714.

A Genetic Screen for High Copy Number Suppressors of the Synthetic Lethality Between elg1Δ and srs2Δ in Yeast

Inbal Gazy, Batia Liefshitz, Alex Bronstein, Oren Parnas, Nir Atias, Roded Sharan, Martin Kupiec

G3 (Bethesda) 2013 May; 3(5): 917–926. Published online 2013 May 1. doi: 10.1534/g3.113.005561

PMCID:: PMC3656737

Abstract Article PDF–1.0M

Select item 334742115.

The Saccharomyces cerevisiae Nrd1-Nab3 Transcription Termination Pathway Acts in Opposition to Ras Signaling and Mediates Response to Nutrient Depletion

Miranda M. Darby, Leo Serebreni, Xuewen Pan, Jef D. Boeke, Jeffry L. Corden

Mol Cell Biol. 2012 May; 32(10): 1762–1775. doi: 10.1128/MCB.00050-12

PMCID:: PMC3347421

Abstract Article PDF–1.5M

Select item 393722216.

High-Resolution Profiling of Stationary-Phase Survival Reveals Yeast Longevity Factors and Their Genetic Interactions

Erika Garay, Sergio E. Campos, Jorge González de la Cruz, Ana P. Gaspar, Adrian Jinich, Alexander DeLuna

PLoS Genet. 2014 Feb; 10(2): e1004168. Published online 2014 Feb 27. doi: 10.1371/journal.pgen.1004168

PMCID:: PMC3937222

Abstract Article PDF–4.9M

Select item 145629617.

Genomewide Screen Reveals a Wide Regulatory Network for Di/Tripeptide Utilization in Saccharomyces cerevisiae

Houjian Cai, Sarah Kauffman, Fred Naider, Jeffrey M. Becker

Genetics. 2006 Mar; 172(3): 1459–1476. doi: 10.1534/genetics.105.053041

PMCID:: PMC1456296

Abstract Article PDF–740K

Select item 308402618.

Uncoupling of GTP hydrolysis from eIF6 release on the ribosome causes Shwachman-Diamond syndrome

Andrew J. Finch, Christine Hilcenko, Nicolas Basse, Lesley F. Drynan, Beatriz Goyenechea, Tobias F. Menne, África González Fernández, Paul Simpson, Clive S. D'Santos, Mark J. Arends, Jean Donadieu, Christine Bellanné-Chantelot, Michael Costanzo, Charles Boone, Andrew N. McKenzie, Stefan M.V. Freund, Alan J. Warren

Genes Dev. 2011 May 1; 25(9): 917–929. doi: 10.1101/gad.623011