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Select item 69806761.

A non-amyloid prion particle that activates a heritable gene expression program

Anupam K. Chakravarty, Tina Smejkal, Alan Itakura, David M. Garcia, Daniel F. Jarosz

Mol Cell. Author manuscript; available in PMC 2021 Jan 16.

Published in final edited form as: Mol Cell. 2020 Jan 16; 77(2): 251–265.e9. Published online 2019 Nov 19. doi: 10.1016/j.molcel.2019.10.028

PMCID:: PMC6980676

Abstract Article PDF–2.1M

Select item 69807812.

Widespread prion-based control of growth and differentiation strategies in Saccharomyces cerevisiae

Alan K. Itakura, Anupam K. Chakravarty, Christopher M. Jakobson, Daniel F. Jarosz

Mol Cell. Author manuscript; available in PMC 2021 Jan 16.

Published in final edited form as: Mol Cell. 2020 Jan 16; 77(2): 266–278.e6. Published online 2019 Nov 19. doi: 10.1016/j.molcel.2019.10.027

PMCID:: PMC6980781

Abstract Article PDF–2.1M

Select item 28365653.

Involvement of Vts1, a structure-specific RNA-binding protein, in Okazaki fragment processing in yeast

Chul-Hwan Lee, Yong-Keol Shin, Thi Thu Huong Phung, Jae Seok Bae, Young-Hoon Kang, Tuan Anh Nguyen, Jeong-Hoon Kim, Do-Hyung Kim, Min-Jung Kang, Sung-Ho Bae, Yeon-Soo Seo

Nucleic Acids Res. 2010 Mar; 38(5): 1583–1595. Published online 2009 Dec 9. doi: 10.1093/nar/gkp1135

PMCID:: PMC2836565

Abstract Article PDF–1.8M

Select item 47516934.

Snf1-Dependent Transcription Confers Glucose-Induced Decay upon the mRNA Product

Katherine A. Braun, Kenneth M. Dombek, Elton T. Young

Mol Cell Biol. 2016 Feb 15; 36(4): 628–644. Prepublished online 2015 Dec 14. Published online 2016 Feb 1. doi: 10.1128/MCB.00436-15

PMCID:: PMC4751693

Abstract Article PDF–1.7M

Select item 34684685.

The eIF4E-Binding Protein Eap1p Functions in Vts1p-Mediated Transcript Decay

Laura M. Rendl, Melissa A. Bieman, Heli K. Vari, Craig A. Smibert

PLoS One. 2012; 7(10): e47121. Published online 2012 Oct 10. doi: 10.1371/journal.pone.0047121

PMCID:: PMC3468468

Abstract Article PDF–489K

Select item 24419896.

S. cerevisiae Vts1p induces deadenylation-dependent transcript degradation and interacts with the Ccr4p-Pop2p-Not deadenylase complex

Laura M. Rendl, Melissa A. Bieman, Craig A. Smibert

RNA. 2008 Jul; 14(7): 1328–1336. doi: 10.1261/rna.955508

PMCID:: PMC2441989

Abstract Article PDF–669K

Select item 50663067.

Intrinsically Disordered Proteins Drive Emergence and Inheritance of Biological Traits

Sohini Chakrabortee, James S. Byers, Sandra Jones, David Garcia, Bhupinder Bhullar, Amelia Chang, Richard She, Laura Lee, Brayon Fremin, Susan Lindquist, Daniel F. Jarosz

Cell. Author manuscript; available in PMC 2017 Oct 6.

Published in final edited form as: Cell. 2016 Oct 6; 167(2): 369–381.e12. Published online 2016 Sep 29. doi: 10.1016/j.cell.2016.09.017

PMCID:: PMC5066306

Abstract Article PDF–794K

Select item 39343668.

Therapeutic modulation of eIF2a-phosphorylation rescues TDP-43 toxicity in amyotrophic lateral sclerosis disease models

Hyung-Jun Kim, Alya R. Raphael, Eva S. LaDow, Leeanne McGurk, Ross Weber, John Q. Trojanowski, Virginia M.-Y. Lee, Steven Finkbeiner, Aaron D. Gitler, Nancy M. Bonini

Nat Genet. Author manuscript; available in PMC 2014 Aug 1.

Published in final edited form as: Nat Genet. 2014 Feb; 46(2): 152–160. Published online 2013 Dec 15. doi: 10.1038/ng.2853

PMCID:: PMC3934366

Abstract Article PDF–2.1M

Select item 22483389.

Multiple Pathways Influence Mitochondrial Inheritance in Budding Yeast

Rebecca L. Frederick, Koji Okamoto, Janet M. Shaw

Genetics. 2008 Feb; 178(2): 825–837. doi: 10.1534/genetics.107.083055

PMCID:: PMC2248338

Abstract Article PDF–909K

Select item 714070710.

Heme, A Metabolic Sensor, Directly Regulates the Activity of the KDM4 Histone Demethylase Family and Their Interactions with Partner Proteins

Purna Chaitanya Konduri, Tianyuan Wang, Narges Salamat, Li Zhang

Cells. 2020 Mar; 9(3): 773. Published online 2020 Mar 22. doi: 10.3390/cells9030773

PMCID:: PMC7140707

Abstract Article PDF–3.2M

Select item 390688911.

A yeast phenomic model for the gene interaction network modulating CFTR-ΔF508 protein biogenesis

Raymond J Louie, Jingyu Guo, John W Rodgers, Rick White, Najaf A Shah, Silvere Pagant, Peter Kim, Michael Livstone, Kara Dolinski, Brett A McKinney, Jeong Hong, Eric J Sorscher, Jennifer Bryan, Elizabeth A Miller, John L Hartman, IV

Genome Med. 2012; 4(12): 103. Published online 2012 Dec 27. doi: 10.1186/gm404

PMCID:: PMC3906889

Abstract Article PDF–2.5M

Select item 295043612.

Sulfate Assimilation Mediates Tellurite Reduction and Toxicity in Saccharomyces cerevisiae

Lars-Göran Ottosson, Katarina Logg, Sebastian Ibstedt, Per Sunnerhagen, Mikael Käll, Anders Blomberg, Jonas Warringer

Eukaryot Cell. 2010 Oct; 9(10): 1635–1647. doi: 10.1128/EC.00078-10

PMCID:: PMC2950436

Abstract Article PDF–3.2M

Select item 538928813.

Comprehensive and quantitative mapping of RNA–protein interactions across a transcribed eukaryotic genome

Richard She, Anupam K. Chakravarty, Curtis J. Layton, Lauren M. Chircus, Johan O. L. Andreasson, Nandita Damaraju, Peter L. McMahon, Jason D. Buenrostro, Daniel F. Jarosz, William J. Greenleaf

Proc Natl Acad Sci U S A. 2017 Apr 4; 114(14): 3619–3624. Published online 2017 Mar 21. doi: 10.1073/pnas.1618370114

PMCID:: PMC5389288

Abstract Article PDF–1.3M

Select item 266141514.

Whi3, a Developmental Regulator of Budding Yeast, Binds a Large Set of mRNAs Functionally Related to the Endoplasmic Reticulum

Neus Colomina, Francisco Ferrezuelo, Hongyin Wang, Martí Aldea, Eloi Garí

J Biol Chem. 2008 Oct 17; 283(42): 28670–28679. doi: 10.1074/jbc.M804604200

PMCID:: PMC2661415

Abstract Article PDF–680K

Select item 506299415.

Tma108, a putative M1 aminopeptidase, is a specific nascent chain-associated protein in Saccharomyces cerevisiae

Thierry Delaveau, Dimitri Davoine, Ariane Jolly, Antoine Vallot, Jérôme O. Rouvière, Athenaïs Gerber, Sandra Brochet, Marion Plessis, Roxane Roquigny, Jawad Merhej, Thibaut Leger, Camille Garcia, Gaëlle Lelandais, Elodie Laine, Benoit Palancade, Frédéric Devaux, Mathilde Garcia

Nucleic Acids Res. 2016 Oct 14; 44(18): 8826–8841. Published online 2016 Aug 31. doi: 10.1093/nar/gkw732

PMCID:: PMC5062994

Abstract Article PDF–3.3M

Select item 318302316.

Clathrin light chain directs endocytosis by influencing the binding of the yeast Hip1R homologue, Sla2, to F-actin

Douglas R. Boettner, Helena Friesen, Brenda Andrews, Sandra K. Lemmon

Mol Biol Cell. 2011 Oct 1; 22(19): 3699–3714. doi: 10.1091/mbc.E11-07-0628

PMCID:: PMC3183023

Abstract Article PDF–6.5M

Select item 1051664217.

ISW1a modulates cohesin distribution in centromeric and pericentromeric regions

Ireneusz Litwin, Małgorzata Nowicka, Katarzyna Markowska, Ewa Maciaszczyk-Dziubińska, Paulina Tomaszewska, Robert Wysocki, Karol Kramarz

Nucleic Acids Res. 2023 Sep 22; 51(17): 9101–9121. Published online 2023 Jul 24. doi: 10.1093/nar/gkad612

PMCID:: PMC10516642

Abstract Article PDF–2.8M

Select item 751569418.

RNA-binding and prion domains: the Yin and Yang of phase separation

Nieves Lorenzo Gotor, Alexandros Armaos, Giulia Calloni, Marc Torrent Burgas, R Martin Vabulas, Natalia Sanchez De Groot, Gian Gaetano Tartaglia

Nucleic Acids Res. 2020 Sep 25; 48(17): 9491–9504. Published online 2020 Aug 28. doi: 10.1093/nar/gkaa681

PMCID:: PMC7515694

Abstract Article PDF–3.1M

Select item 306367119.

A Genome-Wide Enhancer Screen Implicates Sphingolipid Composition in Vacuolar ATPase Function in Saccharomyces cerevisiae

Gregory C. Finnigan, Margret Ryan, Tom H. Stevens

Genetics. 2011 Mar; 187(3): 771–783. doi: 10.1534/genetics.110.125567

PMCID:: PMC3063671

Abstract Article PDF–1.5M

Select item 332256720.

Characterization of a Highly Conserved Histone Related Protein, Ydl156w, and Its Functional Associations Using Quantitative Proteomic Analyses

Joshua M. Gilmore, Mihaela E. Sardiu, Swaminathan Venkatesh, Brent Stutzman, Allison Peak, Chris W. Seidel, Jerry L. Workman, Laurence Florens, Michael P. Washburn

Mol Cell Proteomics. 2012 Apr; 11(4): M111.011544. Published online 2011 Dec 22. doi: 10.1074/mcp.M111.011544