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Select item 30010801.

A flexible loop in yeast ribosomal protein L11 coordinates P-site tRNA binding

Michael H. J. Rhodin, Jonathan D. Dinman

Nucleic Acids Res. 2010 Dec; 38(22): 8377–8389. Published online 2010 Aug 12. doi: 10.1093/nar/gkq711

PMCID:: PMC3001080

Abstract Article PDF–7.1M

Select item 48892752.

Functional analysis of the uL11 protein impact on translational machinery

Leszek Wawiórka, Eliza Molestak, Monika Szajwaj, Barbara Michalec-Wawiórka, Aleksandra Boguszewska, Lidia Borkiewicz, Vladyslava Liudkovska, Joanna Kufel, Marek Tchórzewski

Cell Cycle. 2016; 15(8): 1060–1072. Published online 2016 Mar 3. doi: 10.1080/15384101.2016.1154245

PMCID:: PMC4889275

Abstract Article PDF–858K

Select item 47914273.

Structural dynamics of the yeast Shwachman-Diamond syndrome protein (Sdo1) on the ribosome and its implication in the 60S subunit maturation

Chengying Ma, Kaige Yan, Dan Tan, Ningning Li, Yixiao Zhang, Yi Yuan, Zhifei Li, Meng-Qiu Dong, Jianlin Lei, Ning Gao

Protein Cell. 2016 Mar; 7(3): 187–200. Published online 2016 Feb 5. doi: 10.1007/s13238-015-0242-5

PMCID:: PMC4791427

Abstract Article PDF–4.1M

Select item 41067074.

The central core region of yeast ribosomal protein L11 is important for subunit joining and translational fidelity

Michael H. J. Rhodin, Rasa Rakauskaitė, Jonathan D. Dinman

Mol Genet Genomics. Author manuscript; available in PMC 2014 Jul 22.

Published in final edited form as: Mol Genet Genomics. 2011 Jun; 285(6): 505–516. Published online 2011 Apr 26. doi: 10.1007/s00438-011-0623-2

PMCID:: PMC4106707

Abstract Article PDF–1.3M

Select item 21163835.

Depletion of yeast ribosomal proteins L16 or rp59 disrupts ribosome assembly

J Cell Biol. 1990 Dec 1; 111(6): 2261–2274. doi: 10.1083/jcb.111.6.2261

PMCID:: PMC2116383

Summary PDF–1.6M

Select item 11855776.

Synergistic defect in 60S ribosomal subunit assembly caused by a mutation of Rrs1p, a ribosomal protein L11-binding protein, and 3′-extension of 5S rRNA in Saccharomyces cerevisiae

Masanobu Nariai, Tomohisa Tanaka, Takafumi Okada, Chiharu Shirai, Chihiro Horigome, Keiko Mizuta

Nucleic Acids Res. 2005; 33(14): 4553–4562. Published online 2005 Aug 12. doi: 10.1093/nar/gki772

PMCID:: PMC1185577

Abstract Article PDF–422K

Select item 20003237.

Assembly factors Rpf2 and Rrs1 recruit 5S rRNA and ribosomal proteins rpL5 and rpL11 into nascent ribosomes

Jingyu Zhang, Piyanun Harnpicharnchai, Jelena Jakovljevic, Lan Tang, Yurong Guo, Marlene Oeffinger, Michael P. Rout, Shawna L. Hiley, Timothy Hughes, John L. Woolford, Jr.

Genes Dev. 2007 Oct 15; 21(20): 2580–2592. doi: 10.1101/gad.1569307

PMCID:: PMC2000323

Abstract Article PDF–786K

Select item 3685558.

Mild temperature shock alters the transcription of a discrete class of Saccharomyces cerevisiae genes.

C H Kim, J R Warner

Mol Cell Biol. 1983 Mar; 3(3): 457–465. doi: 10.1128/mcb.3.3.457

PMCID:: PMC368555

Summary Page Browse PDF–1.3M

Select item 5486589.

Central role of Ifh1p–Fhl1p interaction in the synthesis of yeast ribosomal proteins

Dipayan Rudra, Yu Zhao, Jonathan R Warner

EMBO J. 2005 Feb 9; 24(3): 533–542. Published online 2005 Feb 3. doi: 10.1038/sj.emboj.7600553

PMCID:: PMC548658

Abstract Article PDF–314K

Select item 738508410.

Coupling of 5S RNP rotation with maturation of functional centers during large ribosomal subunit assembly

Jelena Micic, Yu Li, Shan Wu, Daniel Wilson, Beril Tutuncuoglu, Ning Gao, John L. Woolford, Jr.

Nat Commun. 2020; 11: 3751. Published online 2020 Jul 27. doi: 10.1038/s41467-020-17534-5

PMCID:: PMC7385084

Abstract Article PDF–4.6M

Select item 345855411.

Hierarchical recruitment into nascent ribosomes of assembly factors required for 27SB pre-rRNA processing in Saccharomyces cerevisiae

Jason Talkish, Jingyu Zhang, Jelena Jakovljevic, Edward W. Horsey, John L. Woolford, Jr

Nucleic Acids Res. 2012 Sep; 40(17): 8646–8661. Published online 2012 Jun 25. doi: 10.1093/nar/gks609

PMCID:: PMC3458554

Abstract Article PDF–10M

Select item 344670512.

Ribosomal proteins L7 and L8 function in concert with six A₃ assembly factors to propagate assembly of domains I and II of 25S rRNA in yeast 60S ribosomal subunits

Jelena Jakovljevic, Uli Ohmayer, Michael Gamalinda, Jason Talkish, Lisa Alexander, Jan Linnemann, Philipp Milkereit, John L. Woolford, Jr.

RNA. 2012 Oct; 18(10): 1805–1822. doi: 10.1261/rna.032540.112

PMCID:: PMC3446705

Abstract Article PDF–1.8M

Select item 361546113.

Joining of 60S subunits and a translation-like cycle in 40S ribosome maturation

Bethany S. Strunk, Megan N. Novak, Crystal L. Young, Katrin Karbstein

Cell. Author manuscript; available in PMC 2013 Jul 6.

Published in final edited form as: Cell. 2012 Jul 6; 150(1): 111–121. doi: 10.1016/j.cell.2012.04.044

PMCID:: PMC3615461

Abstract Article PDF–3.4M

Select item 12288114.

Direct mass spectrometric analysis of intact proteins of the yeast large ribosomal subunit using capillary LC/FTICR

Sang-Won Lee, Scott J. Berger, Suzana Martinović, Ljiljana Paša-Tolić, Gordon A. Anderson, Yufeng Shen, Rui Zhao, Richard D. Smith

Proc Natl Acad Sci U S A. 2002 Apr 30; 99(9): 5942–5947. doi: 10.1073/pnas.082119899

PMCID:: PMC122881

Abstract Article PDF–197K

Select item 341606115.

A Lysine-Rich Region within Fungal BAG Domain-Containing Proteins Mediates a Novel Association with Ribosomes

Jacob Verghese, Kevin A. Morano

Eukaryot Cell. 2012 Aug; 11(8): 1003–1011. doi: 10.1128/EC.00146-12

PMCID:: PMC3416061

Abstract Article PDF–1.8M

Select item 427901416.

The Hsp90 Cochaperones Cpr6, Cpr7, and Cns1 Interact with the Intact Ribosome

Victoria R. Tenge, Abbey D. Zuehlke, Neelima Shrestha, Jill L. Johnson

Eukaryot Cell. 2015 Jan; 14(1): 55–63. Prepublished online 2014 Nov 7. Published online 2014 Dec 30. doi: 10.1128/EC.00170-14

PMCID:: PMC4279014

Abstract Article PDF–1.2M

Select item 353496517.

A Ribosome-Bound Quality Control Complex Triggers Degradation of Nascent Peptides and Signals Translation Stress

Onn Brandman, Jacob Stewart-Ornstein, Daisy Wong, Adam Larson, Christopher C. Williams, Gene-Wei Li, Sharleen Zhou, David King, Peter S. Shen, Jimena Weibezahn, Joshua G. Dunn, Silvi Rouskin, Toshifumi Inada, Adam Frost, Jonathan S. Weissman

Cell. Author manuscript; available in PMC 2013 May 21.

Published in final edited form as: Cell. 2012 Nov 21; 151(5): 1042–1054. doi: 10.1016/j.cell.2012.10.044

PMCID:: PMC3534965

Abstract Article PDF–4.1M

Select item 523736118.

Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes

Shan Wu, Beril Tutuncuoglu, Kaige Yan, Hailey Brown, Yixiao Zhang, Dan Tan, Michael Gamalinda, Yi Yuan, Zhifei Li, Jelena Jakovljevic, Chengying Ma, Jianlin Lei, Meng-Qiu Dong, John L. Woolford, Jr, Ning Gao

Nature. Author manuscript; available in PMC 2017 Jan 14.

Published in final edited form as: Nature. 2016 Jun 2; 534(7605): 133–137. doi: 10.1038/nature17942

PMCID:: PMC5237361

Abstract Article PDF–4.6M

Select item 1129460519.

Receptor-mediated cargo hitchhiking on bulk autophagy

Eigo Takeda, Takahiro Isoda, Sachiko Hosokawa, Yu Oikawa, Shukun Hotta-Ren, Alexander I May, Yoshinori Ohsumi

EMBO J. 2024 Aug; 43(15): 3116–3140. Published online 2024 May 16. doi: 10.1038/s44318-024-00091-8

PMCID:: PMC11294605

Abstract Article PDF–5.6M

Select item 423455620.

Structural basis for translational surveillance by the large ribosomal subunit-associated protein quality control complex

Dmitry Lyumkis, Dario Oliveira dos Passos, Erich B. Tahara, Kristofor Webb, Eric J. Bennett, Staal Vinterbo, Clinton S. Potter, Bridget Carragher, Claudio A. P. Joazeiro

Proc Natl Acad Sci U S A. 2014 Nov 11; 111(45): 15981–15986. Published online 2014 Oct 27. doi: 10.1073/pnas.1413882111