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Items: 1 to 20 of 23

1.
The Airn lncRNA does not require any DNA elements within its locus to silence distant imprinted genes
Daniel Andergassen, Markus Muckenhuber, Philipp C. Bammer, Tomasz M. Kulinski, Hans-Christian Theussl, Takahiko Shimizu, Josef M. Penninger, Florian M. Pauler, Quanah J. Hudson
PLoS Genet. 2019 Jul; 15(7): e1008268. Published online 2019 Jul 22. doi: 10.1371/journal.pgen.1008268
Correction in:
PLoS Genet. 2020 Oct; 16(10): e1009151.
PMCID:
PMC6675118
AbstractArticlePDF–2.1M
2.
Microarray analysis reveals long non-coding RNA SOX2OT as a novel candidate regulator in diabetic nephropathy
Xiaoxue Zhang, Jin Shang, Xiaoyang Wang, Genyang Cheng, Yumin Jiang, Dong Liu, Jing Xiao, Zhanzheng Zhao
Mol Med Rep. 2018 Dec; 18(6): 5058–5068. Published online 2018 Oct 4. doi: 10.3892/mmr.2018.9534
PMCID:
PMC6236268
AbstractArticlePDF–2.9M
3.
Airn Regulates Igf2bp2 Translation in Cardiomyocytes
Mohammed Rabiul Hosen, Giuseppe Militello, Tyler Weirick, Yuliya Ponomareva, Sujith Dassanayaka, Joseph B. Moore, IV, Claudia Döring, Marcin Wysoczynski, Steven P. Jones, Stefanie Dimmeler, Shizuka Uchida
Circ Res. Author manuscript; available in PMC 2019 May 11.
Published in final edited form as: Circ Res. 2018 May 11; 122(10): 1347–1353. Published online 2018 Feb 26. doi: 10.1161/CIRCRESAHA.117.312215
PMCID:
PMC5948151
AbstractArticlePDF–1.3M
4.
Antagonist Xist and Tsix co-transcription during mouse oogenesis and maternal Xist expression during pre-implantation development calls into question the nature of the maternal imprint on the X chromosome
Jane Lynda Deuve, Amélie Bonnet-Garnier, Nathalie Beaujean, Philip Avner, Céline Morey
Epigenetics. 2015 Oct; 10(10): 931–942. Published online 2015 Aug 12. doi: 10.1080/15592294.2015.1081327
PMCID:
PMC4844198
AbstractArticlePDF–846K
5.
Consequence of Menin Deficiency in Mouse Adipocytes Derived by In Vitro Differentiation
Vaishali I. Parekh, Sita D. Modali, Shruti S. Desai, Sunita K. Agarwal
Int J Endocrinol. 2015; 2015: 149826. Published online 2015 Jul 2. doi: 10.1155/2015/149826
PMCID:
PMC4503551
AbstractArticlePDF–2.7M
6.
Long Non-Coding RNA Expression Profiling of Mouse Testis during Postnatal Development
Jin Sun, Yi Lin, Ji Wu
PLoS One. 2013; 8(10): e75750. Published online 2013 Oct 10. doi: 10.1371/journal.pone.0075750
PMCID:
PMC3794988
AbstractArticlePDF–634K
7.
An RNA-Seq Strategy to Detect the Complete Coding and Non-Coding Transcriptome Including Full-Length Imprinted Macro ncRNAs
Ru Huang, Markus Jaritz, Philipp Guenzl, Irena Vlatkovic, Andreas Sommer, Ido M. Tamir, Hendrik Marks, Thorsten Klampfl, Robert Kralovics, Hendrik G. Stunnenberg, Denise P. Barlow, Florian M. Pauler
PLoS One. 2011; 6(11): e27288. Published online 2011 Nov 10. doi: 10.1371/journal.pone.0027288
PMCID:
PMC3213133
AbstractArticlePDF–1.3M
8.
Genome-wide survey reveals dynamic widespread tissue-specific changes in DNA methylation during development
Ping Liang, Fei Song, Srimoyee Ghosh, Evan Morien, Maochun Qin, Saleh Mahmood, Kyoko Fujiwara, Jun Igarashi, Hiroki Nagase, William A Held
BMC Genomics. 2011; 12: 231. Published online 2011 May 11. doi: 10.1186/1471-2164-12-231
PMCID:
PMC3118215
AbstractArticlePDF–443K
9.
lncRNAdb: a reference database for long noncoding RNAs
Paulo P. Amaral, Michael B. Clark, Dennis K. Gascoigne, Marcel E. Dinger, John S. Mattick
Nucleic Acids Res. 2011 Jan; 39(Database issue): D146–D151. Published online 2010 Nov 25. doi: 10.1093/nar/gkq1138
PMCID:
PMC3013714
AbstractArticlePDF–3.0M
10.
The Regulation of Non-Coding RNA Expression in the Liver of Mice Fed DDC
Joan Oliva, Fawzia Bardag-Gorce, Barbara A French, Jun Li, Samuel W French
Exp Mol Pathol. Author manuscript; available in PMC 2010 Aug 1.
Published in final edited form as: Exp Mol Pathol. 2009 Aug; 87(1): 12–19. Published online 2009 Apr 9. doi: 10.1016/j.yexmp.2009.03.006
PMCID:
PMC2885145
AbstractArticlePDF–1.3M
11.
An in vitro ES cell imprinting model shows that imprinted expression of the Igf2r gene arises from an allele-specific expression bias
Paulina A. Latos, Stefan H. Stricker, Laura Steenpass, Florian M. Pauler, Ru Huang, Basak H. Senergin, Kakkad Regha, Martha V. Koerner, Katarzyna E. Warczok, Christine Unger, Denise P. Barlow
Development. Author manuscript; available in PMC 2010 Mar 27.
Published in final edited form as: Development. 2009 Feb; 136(3): 437–448. doi: 10.1242/dev.032060
PMCID:
PMC2846269
AbstractArticlePDF–2.1M
12.
Identification of the human homolog of the imprinted mouse Air non-coding RNA
Iveta Y. Yotova, Irena M. Vlatkovic, Florian M. Pauler, Katarzyna E. Warczok, Peter F. Ambros, Mitsuo Oshimura, Hans-Christian Theussl, Manfred Gessler, Erwin F. Wagner, Denise P. Barlow
Genomics. Author manuscript; available in PMC 2010 Mar 27.
Published in final edited form as: Genomics. 2008 Dec; 92(6): 464–473. Published online 2008 Oct 2. doi: 10.1016/j.ygeno.2008.08.004
PMCID:
PMC2846268
AbstractArticlePDF–1.5M
13.
Silencing and transcriptional properties of the imprinted Airn ncRNA are independent of the endogenous promoter
Stefan H Stricker, Laura Steenpass, Florian M Pauler, Federica Santoro, Paulina A Latos, Ru Huang, Martha V Koerner, Mathew A Sloane, Katarzyna E Warczok, Denise P Barlow
EMBO J. 2008 Dec 3; 27(23): 3116–3128. Published online 2008 Nov 13. doi: 10.1038/emboj.2008.239
PMCID:
PMC2599881
AbstractArticlePDF–1.6M
14.
The imprinted Air ncRNA is an atypical RNAPII transcript that evades splicing and escapes nuclear export
Christine I M Seidl, Stefan H Stricker, Denise P Barlow
EMBO J. 2006 Aug 9; 25(15): 3565–3575. Published online 2006 Jul 27. doi: 10.1038/sj.emboj.7601245
PMCID:
PMC1538572
AbstractArticlePDF–471K
15.
Clusters of Internally Primed Transcripts Reveal Novel Long Noncoding RNAs
Masaaki Furuno, Ken C Pang, Noriko Ninomiya, Shiro Fukuda, Martin C Frith, Carol Bult, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, John S Mattick, Harukazu Suzuki
PLoS Genet. 2006 Apr; 2(4): e37. Published online 2006 Apr 28. doi: 10.1371/journal.pgen.0020037
PMCID:
PMC1449886
AbstractArticlePDF–719K
16.
Long-range DNase I hypersensitivity mapping reveals the imprinted Igf2r and Air promoters share cis-regulatory elements
Florian M. Pauler, Stefan H. Stricker, Katarzyna E. Warczok, Denise P. Barlow
Genome Res. 2005 Oct; 15(10): 1379–1387. doi: 10.1101/gr.3783805
PMCID:
PMC1240080
AbstractArticlePDF–804K
17.
Bidirectional action of the Igf2r imprint control element on upstream and downstream imprinted genes
Ronald Zwart, Frank Sleutels, Anton Wutz, Alfred H. Schinkel, Denise P. Barlow
Genes Dev. 2001 Sep 15; 15(18): 2361–2366. doi: 10.1101/gad.206201
PMCID:
PMC312779
AbstractArticlePDF–151K
18.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
19.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
20.
Imprinted silencing of Slc22a2 and Slc22a3 does not need transcriptional overlap between Igf2r and Air
Frank Sleutels, Grace Tjon, Thomas Ludwig, Denise P. Barlow
EMBO J. 2003 Jul 15; 22(14): 3696–3704. doi: 10.1093/emboj/cdg341
PMCID:
PMC165611
AbstractArticlePDF–235K

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