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Select item 70510751.

HIV-1 reverse transcriptase and protease mutations for drug-resistance detection among treatment-experienced and naïve HIV-infected individuals

Farah Bokharaei-Salim, Maryam Esghaei, Khadijeh Khanaliha, Saeed Kalantari, Arezoo Marjani, Atousa Fakhim, Hossein Keyvani

PLoS One. 2020; 15(3): e0229275. Published online 2020 Mar 2. doi: 10.1371/journal.pone.0229275

PMCID:: PMC7051075

Abstract Article PDF–886K

Select item 70443012.

Characterisation of HIV-1 Molecular Epidemiology in Nigeria: Origin, Diversity, Demography and Geographic Spread

Jamirah Nazziwa, Nuno Rodrigues Faria, Beth Chaplin, Holly Rawizza, Phyllis Kanki, Patrick Dakum, Alash’le Abimiku, Man Charurat, Nicaise Ndembi, Joakim Esbjörnsson

Sci Rep. 2020; 10: 3468. Published online 2020 Feb 26. doi: 10.1038/s41598-020-59944-x

PMCID:: PMC7044301

Abstract Article PDF–1.8M

Select item 70386563.

HLA Heterozygote Advantage against HIV-1 Is Driven by Quantitative and Qualitative Differences in HLA Allele-Specific Peptide Presentation

Jatin Arora, Federica Pierini, Paul J McLaren, Mary Carrington, Jacques Fellay, Tobias L Lenz

Mol Biol Evol. 2020 Mar; 37(3): 639–650. Published online 2019 Oct 22. doi: 10.1093/molbev/msz249

PMCID:: PMC7038656

Abstract Article PDF–700K

Select item 70229434.

Prevalence of Non-B HIV-1 Subtypes in North Italy and Analysis of Transmission Clusters Based on Sequence Data Analysis

Giovanni Lorenzin, Franco Gargiulo, Arnaldo Caruso, Francesca Caccuri, Emanuele Focà, Anna Celotti, Eugenia Quiros-Roldan, Ilaria Izzo, Francesco Castelli, Maria A. De Francesco

Microorganisms. 2020 Jan; 8(1): 36. Published online 2019 Dec 23. doi: 10.3390/microorganisms8010036

PMCID:: PMC7022943

Abstract Article PDF–6.1M

Select item 70189555.

RETRACTED ARTICLE: Dramatic HIV DNA degradation associated with spontaneous HIV suppression and disease-free outcome in a young seropositive woman following her infection

Philippe Colson, Catherine Dhiver, Catherine Tamalet, Jeremy Delerce, Olga O. Glazunova, Maxime Gaudin, Anthony Levasseur, Didier Raoult

Sci Rep. 2020; 10: 2548. Published online 2020 Feb 13. doi: 10.1038/s41598-020-58969-6

Retraction in:: Sci Rep. 2024; 14: 9989.

Correction in:: Sci Rep. 2020; 10: 14829.

PMCID:: PMC7018955

Abstract Article

Select item 70124096.

HIV-1 subtypes and drug resistance mutations among female sex workers varied in different cities and regions of the Democratic Republic of Congo

Eun Hee Kwon, Godefroid M. A. Musema, Jessica Boelter, Sydney Townsend, Désiré Tshala-Katumbay, Patrick K. Kayembe, John West, Charles Wood

PLoS One. 2020; 15(2): e0228670. Published online 2020 Feb 11. doi: 10.1371/journal.pone.0228670

PMCID:: PMC7012409

Abstract Article PDF–1.4M

Select item 70049827.

A cross-sectional study to characterize local HIV-1 dynamics in Washington, DC using next-generation sequencing

Keylie M. Gibson, Kamwing Jair, Amanda D. Castel, Matthew L. Bendall, Brittany Wilbourn, Jeanne A. Jordan, Keith A. Crandall, Marcos Pérez-Losada, the DC Cohort Executive Committee

Sci Rep. 2020; 10: 1989. Published online 2020 Feb 6. doi: 10.1038/s41598-020-58410-y

Correction in:: Sci Rep. 2020; 10: 7099.

PMCID:: PMC7004982

Abstract Article PDF–1.6M

Select item 69807968.

Viral and Host Factors are Related to the Progression of HIV Diseases in Mimika, Papua

Mirna Widiyanti, Moch Irfan Hadi

Open Access Maced J Med Sci. 2019 Oct 30; 7(20): 3429–3432. Published online 2019 Oct 14. doi: 10.3889/oamjms.2019.437

PMCID:: PMC6980796

Abstract Article PDF–191K

Select item 69783129.

Evaluation of screening platforms for virus-like particle production with the baculovirus expression vector system in insect cells

Florian Strobl, Sahar Masoumeh Ghorbanpour, Dieter Palmberger, Gerald Striedner

Sci Rep. 2020; 10: 1065. Published online 2020 Jan 23. doi: 10.1038/s41598-020-57761-w

PMCID:: PMC6978312

Abstract Article PDF–1.5M

Select item 697815110.

Genome-scale analysis of evolutionary rate and selection in a fast-expanding Spanish cluster of HIV-1 subtype F1

Juan Á. Patiño-Galindo, Francisco Domínguez, María T. Cuevas, Elena Delgado, Mónica Sánchez, Lucía Pérez-Álvarez, Michael M. Thomson, Rafael Sanjuán, Fernando González-Candelas, José M. Cuevas

Infect Genet Evol. Author manuscript; available in PMC 2020 Jan 23.

Published in final edited form as: Infect Genet Evol. 2018 Dec 1; 66: 43–47. Published online 2018 Sep 13. doi: 10.1016/j.meegid.2018.09.008

PMCID:: PMC6978151

Abstract Article PDF–668K

Select item 693683511.

HIV chromatin is a preferred target for drugs that bind in the DNA minor groove

Clayton K. Collings, Donald W. Little, III, Samuel J. Schafer, John N. Anderson

PLoS One. 2019; 14(12): e0216515. Published online 2019 Dec 30. doi: 10.1371/journal.pone.0216515

PMCID:: PMC6936835

Abstract Article PDF–2.6M

Select item 691501012.

HIV-1 Reverse Transcriptase Promotes Tumor Growth and Metastasis Formation via ROS-Dependent Upregulation of Twist

Ekaterina Bayurova, Juris Jansons, Dace Skrastina, Olga Smirnova, Dzeina Mezale, Anastasia Kostyusheva, Dmitry Kostyushev, Stefan Petkov, Philip Podschwadt, Vladimir Valuev-Elliston, Sviataslau Sasinovich, Sergey Korolev, Per Warholm, Anastasia Latanova, Elizaveta Starodubova, Amir Tukhvatulin, Oleg Latyshev, Renat Selimov, Pavel Metalnikov, Alexander Komarov, Olga Ivanova, Tatiana Gorodnicheva, Sergey Kochetkov, Marina Gottikh, Ilze Strumfa, Alexander Ivanov, Ilya Gordeychuk, Maria Isaguliants

Oxid Med Cell Longev. 2019; 2019: 6016278. Published online 2019 Dec 2. doi: 10.1155/2019/6016278

PMCID:: PMC6915010

Abstract Article PDF–3.7M

Select item 690339513.

HIV-1 Vif Triggers Cell Cycle Arrest by Degrading Cellular PPP2R5 Phospho-regulators

Daniel J. Salamango, Terumasa Ikeda, Seyed Arad Moghadasi, Jiayi Wang, Jennifer L. McCann, Artur A. Serebrenik, Diako Ebrahimi, Matthew C. Jarvis, William L. Brown, Reuben S. Harris

Cell Rep. Author manuscript; available in PMC 2019 Dec 10.

Published in final edited form as: Cell Rep. 2019 Oct 29; 29(5): 1057–1065.e4. doi: 10.1016/j.celrep.2019.09.057

PMCID:: PMC6903395

Abstract Article PDF–1.9M

Select item 689378814.

HIV-1 Envelope Glycoprotein Amino Acids Signatures Associated with Clade B Transmitted/Founder and Recent Viruses

Alexis Kafando, Christine Martineau, Mohamed El-Far, Eric Fournier, Florence Doualla-Bell, Bouchra Serhir, Adama Kazienga, Mohamed Ndongo Sangaré, Mohamed Sylla, Annie Chamberland, Hugues Charest, Cécile L. Tremblay

Viruses. 2019 Nov; 11(11): 1012. Published online 2019 Nov 1. doi: 10.3390/v11111012

PMCID:: PMC6893788

Abstract Article PDF–6.3M

Select item 687256215.

Analysis of HIV-1 diversity, primary drug resistance and transmission networks in Croatia

Maja Oroz, Josip Begovac, Ana Planinić, Filip Rokić, Maja M. Lunar, Tomaž Mark Zorec, Robert Beluzić, Petra Korać, Oliver Vugrek, Mario Poljak, Snježana Židovec Lepej

Sci Rep. 2019; 9: 17307. Published online 2019 Nov 21. doi: 10.1038/s41598-019-53520-8

PMCID:: PMC6872562

Abstract Article PDF–2.0M

Select item 687178516.

Comparison of an in-house ‘home-brew’ and commercial ViroSeq integrase genotyping assays on HIV-1 subtype C samples

Kaelo K. Seatla, Wonderful T. Choga, Mompati Mogwele, Thabo Diphoko, Dorcas Maruapula, Lucy Mupfumi, Rosemary M. Musonda, Christopher F. Rowley, Ava Avalos, Ishmael Kasvosve, Sikhulile Moyo, Simani Gaseitsiwe

PLoS One. 2019; 14(11): e0224292. Published online 2019 Nov 21. doi: 10.1371/journal.pone.0224292

PMCID:: PMC6871785

Abstract Article PDF–1.7M

Select item 686408917.

Novel gRNA design pipeline to develop broad-spectrum CRISPR/Cas9 gRNAs for safe targeting of the HIV-1 quasispecies in patients

Neil T. Sullivan, Will Dampier, Cheng-Han Chung, Alexander G. Allen, Andrew Atkins, Vanessa Pirrone, Greg Homan, Shendra Passic, Jean Williams, Wen Zhong, Katherine Kercher, Mathew Desimone, Luna Li, Gregory C. Antell, Joshua Chang Mell, Garth D. Ehrlich, Zsofia Szep, Jeffrey M. Jacobson, Michael R. Nonnemacher, Brian Wigdahl

Sci Rep. 2019; 9: 17088. Published online 2019 Nov 19. doi: 10.1038/s41598-019-52353-9

PMCID:: PMC6864089

Abstract Article PDF–4.2M

Select item 686318718.

SNAPPy: A snakemake pipeline for scalable HIV-1 subtyping by phylogenetic pairing

Pedro M M Araújo, Joana S Martins, Nuno S Osório

Virus Evol. 2019 Jul; 5(2): vez050. Published online 2019 Nov 19. doi: 10.1093/ve/vez050

PMCID:: PMC6863187

Abstract Article PDF–287K

Select item 685128719.

TREM-1 Protects HIV-1-Infected Macrophages from Apoptosis through Maintenance of Mitochondrial Function

Grant R. Campbell, Rachel K. To, Stephen A. Spector

mBio. 2019 Nov-Dec; 10(6): e02638-19. Published online 2019 Nov 12. doi: 10.1128/mBio.02638-19

PMCID:: PMC6851287

Abstract Article PDF–3.2M

Select item 683840320.

Detection of HIV transmission hotspots in British Columbia, Canada: A novel framework for the prioritization and allocation of treatment and prevention resources

Angela McLaughlin, Paul Sereda, Natalia Oliveira, Rolando Barrios, Chanson J. Brumme, Zabrina L. Brumme, Julio S.G. Montaner, Jeffrey B. Joy

EBioMedicine. 2019 Oct; 48: 405–413. Published online 2019 Oct 15. doi: 10.1016/j.ebiom.2019.09.026

PMCID:: PMC6838403

Abstract Article PDF–1.9M

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