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Items: 15

1.
High-throughput discovery of novel developmental phenotypes
Mary E. Dickinson, Ann M. Flenniken, Xiao Ji, Lydia Teboul, Michael D. Wong, Jacqueline K. White, Terrence F. Meehan, Wolfgang J. Weninger, Henrik Westerberg, Hibret Adissu, Candice N. Baker, Lynette Bower, James M. Brown, L. Brianna Caddle, Francesco Chiani, Dave Clary, James Cleak, Mark J. Daly, James M. Denegre, Brendan Doe, Mary E. Dolan, Sarah M. Edie, Helmut Fuchs, Valerie Gailus-Durner, Antonella Galli, Alessia Gambadoro, Juan Gallegos, Shiying Guo, Neil R. Horner, Chih-wei Hsu, Sara J. Johnson, Sowmya Kalaga, Lance C. Keith, Louise Lanoue, Thomas N. Lawson, Monkol Lek, Manuel Mark, Susan Marschall, Jeremy Mason, Melissa L. McElwee, Susan Newbigging, Lauryl M.J. Nutter, Kevin A. Peterson, Ramiro Ramirez-Solis, Douglas J. Rowland, Edward Ryder, Kaitlin E. Samocha, John R. Seavitt, Mohammed Selloum, Zsombor Szoke-Kovacs, Masaru Tamura, Amanda G Trainor, Ilinca Tudose, Shigeharu Wakana, Jonathan Warren, Olivia Wendling, David B. West, Leeyean Wong, Atsushi Yoshiki, The International Mouse Phenotyping Consortium, Daniel G. MacArthur, Glauco P. Tocchini-Valentini, Xiang Gao, Paul Flicek, Allan Bradley, William C. Skarnes, Monica J. Justice, Helen E. Parkinson, Mark Moore, Sara Wells, Robert E. Braun, Karen L. Svenson, Martin Hrabe de Angelis, Yann Herault, Tim Mohun, Ann-Marie Mallon, R. Mark Henkelman, Steve D.M. Brown, David J. Adams, K.C. Kent Lloyd, Colin McKerlie, Arthur L. Beaudet, Maja Bucan, Stephen A. Murray
Nature. Author manuscript; available in PMC 2017 Mar 14.
Published in final edited form as: Nature. 2016 Sep 22; 537(7621): 508–514. Published online 2016 Sep 14. doi: 10.1038/nature19356
Correction in:
Nature. 2017 Nov 16; 551(7680): 398.
PMCID:
PMC5295821
AbstractArticlePDF–3.0M
2.
Pbx regulates patterning of the cerebral cortex in progenitors and postmitotic neurons
Olga Golonzhka, Alex Nord, Paul LF Tang, Susan Lindtner, Athena R Ypsilanti, Elisabetta Ferretti, Axel Visel, Licia Selleri, John L.R. Rubenstein
Neuron. Author manuscript; available in PMC 2016 Dec 16.
Published in final edited form as: Neuron. 2015 Dec 16; 88(6): 1192–1207. Published online 2015 Dec 6. doi: 10.1016/j.neuron.2015.10.045
PMCID:
PMC4688141
AbstractArticlePDF–2.2M
3.
Spatiotemporal regulation of GLI target genes in the mammalian limb bud
Jordan P. Lewandowski, Fang Du, Shilu Zhang, Marian B. Powell, Kristin N. Falkenstein, Hongkai Ji, Steven A. Vokes
Dev Biol. Author manuscript; available in PMC 2016 Oct 1.
Published in final edited form as: Dev Biol. 2015 Oct 1; 406(1): 92–103. Published online 2015 Jul 31. doi: 10.1016/j.ydbio.2015.07.022
PMCID:
PMC4587286
AbstractArticlePDF–2.0M
4.
Association of differentially expressed genes with activation of mouse hepatic stellate cells by high-density cDNA mircoarray
Xiao-Jing Liu, Li Yang, Feng-Ming Luo, Hong-Bin Wu, Qu-Qiang
World J Gastroenterol. 2004 Jun 1; 10(11): 1600–1607. Published online 2004 Jun 1. doi: 10.3748/wjg.v10.i11.1600
PMCID:
PMC4572762
AbstractArticlePDF–180K
5.
Cell Cycle- and Cancer-Associated Gene Networks Activated by Dsg2: Evidence of Cystatin A Deregulation and a Potential Role in Cell-Cell Adhesion
Abhilasha Gupta, Daniela Nitoiu, Donna Brennan-Crispi, Sankar Addya, Natalia A. Riobo, David P. Kelsell, Mỹ G. Mahoney
PLoS One. 2015; 10(3): e0120091. Published online 2015 Mar 18. doi: 10.1371/journal.pone.0120091
PMCID:
PMC4364902
AbstractArticlePDF–1.0M
6.
Transcriptional Regulation of the Protocadherin β Cluster during Her-2 Protein-induced Mammary Tumorigenesis Results from Altered N-Glycan Branching
Huabei Guo, Alison Nairn, Mitche dela Rosa, Tamas Nagy, Shaying Zhao, Kelley Moremen, Michael Pierce
J Biol Chem. 2012 Jul 20; 287(30): 24941–24954. Published online 2012 Jun 4. doi: 10.1074/jbc.M112.369355
PMCID:
PMC3408139
AbstractArticlePDF–2.4M
7.
Regulation of Motility of Myogenic Cells in Filling Limb Muscle Anlagen by Pitx2
Adam L. Campbell, Hung-Ping Shih, Jun Xu, Michael K. Gross, Chrissa Kioussi
PLoS One. 2012; 7(4): e35822. Published online 2012 Apr 27. doi: 10.1371/journal.pone.0035822
PMCID:
PMC3338778
AbstractArticlePDF–4.3M
8.
SMOC1 Is Essential for Ocular and Limb Development in Humans and Mice
Ippei Okada, Haruka Hamanoue, Koji Terada, Takaya Tohma, Andre Megarbane, Eliane Chouery, Joelle Abou-Ghoch, Nadine Jalkh, Ozgur Cogulu, Ferda Ozkinay, Kyoji Horie, Junji Takeda, Tatsuya Furuichi, Shiro Ikegawa, Kiyomi Nishiyama, Satoko Miyatake, Akira Nishimura, Takeshi Mizuguchi, Norio Niikawa, Fumiki Hirahara, Tadashi Kaname, Koh-ichiro Yoshiura, Yoshinori Tsurusaki, Hiroshi Doi, Noriko Miyake, Takahisa Furukawa, Naomichi Matsumoto, Hirotomo Saitsu
Am J Hum Genet. 2011 Jan 7; 88(1): 30–41. doi: 10.1016/j.ajhg.2010.11.012
PMCID:
PMC3014372
AbstractArticlePDF–1.9M
9.
Transcriptome-based systematic identification of extracellular matrix proteins
Ri-ichiroh Manabe, Ko Tsutsui, Tomiko Yamada, Mina Kimura, Itsuko Nakano, Chisei Shimono, Noriko Sanzen, Yutaka Furutani, Tomohiko Fukuda, Yasuko Oguri, Keiko Shimamoto, Daiji Kiyozumi, Yuya Sato, Yoshikazu Sado, Haruki Senoo, Shohei Yamashina, Shiro Fukuda, Jun Kawai, Nobuo Sugiura, Koji Kimata, Yoshihide Hayashizaki, Kiyotoshi Sekiguchi
Proc Natl Acad Sci U S A. 2008 Sep 2; 105(35): 12849–12854. Published online 2008 Aug 29. doi: 10.1073/pnas.0803640105
PMCID:
PMC2529034
AbstractArticlePDF–1.1M
10.
Characterization of Smoc-1 uncovers two transcript variants showing differential tissue and age specific expression in Bubalus bubalis
Jyoti Srivastava, Sanjay Premi, Sudhir Kumar, Iqbal Parwez, Sher Ali
BMC Genomics. 2007; 8: 436. Published online 2007 Nov 28. doi: 10.1186/1471-2164-8-436
PMCID:
PMC2235864
AbstractArticlePDF–993K
11.
Gene array identification of Ipf1/Pdx1-/- regulated genes in pancreatic progenitor cells
Per Svensson, Cecilia Williams, Joakim Lundeberg, Patrik Rydén, Ingela Bergqvist, Helena Edlund
BMC Dev Biol. 2007; 7: 129. Published online 2007 Nov 23. doi: 10.1186/1471-213X-7-129
PMCID:
PMC2212654
AbstractArticlePDF–739K
12.
Characterization of SMOC-2, a modular extracellular calcium-binding protein.
Christian Vannahme, Silke Gösling, Mats Paulsson, Patrik Maurer, Ursula Hartmann
Biochem J. 2003 Aug 1; 373(Pt 3): 805–814. doi: 10.1042/BJ20030532
PMCID:
PMC1223551
SummaryPDF–511K
13.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
14.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
15.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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