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Items: 14

1.
The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1
Gina E. Elsen, Francesco Bedogni, Rebecca D. Hodge, Theo K. Bammler, James W. MacDonald, Susan Lindtner, John L. R. Rubenstein, Robert F. Hevner
Front Neurosci. 2018; 12: 571. Published online 2018 Aug 22. doi: 10.3389/fnins.2018.00571
PMCID:
PMC6113890
AbstractArticlePDF–4.8M
2.
Targeting the Senescence-Overriding Cooperative Activity of Structurally Unrelated H3K9 Demethylases in Melanoma
Yong Yu, Kolja Schleich, Bin Yue, Sujuan Ji, Philipp Lohneis, Kristel Kemper, Mark R. Silvis, Nouar Qutob, Ellen van Rooijen, Melanie Werner-Klein, Lianjie Li, Dhriti Dhawan, Svenja Meierjohann, Maurice Reimann, Abdel Elkahloun, Steffi Treitschke, Bernd Dörken, Christian Speck, Frédérick A. Mallette, Leonard I. Zon, Sheri L. Holmen, Daniel S. Peeper, Yardena Samuels, Clemens A. Schmitt, Soyoung Lee
Cancer Cell. Author manuscript; available in PMC 2018 May 31.
Published in final edited form as: Cancer Cell. 2018 Feb 12; 33(2): 322–336.e8. doi: 10.1016/j.ccell.2018.01.002
PMCID:
PMC5977991
AbstractArticlePDF–2.6M
3.
An efficient method for generation of bi-allelic null mutant mouse embryonic stem cells and its application for investigating epigenetic modifiers
Cynthia L. Fisher, Hendrik Marks, Lily Ting-yin Cho, Robert Andrews, Sam Wormald, Thomas Carroll, Vivek Iyer, Peri Tate, Barry Rosen, Hendrik G. Stunnenberg, Amanda G. Fisher, William C. Skarnes
Nucleic Acids Res. 2017 Dec 1; 45(21): e174. Published online 2017 Sep 13. doi: 10.1093/nar/gkx811
PMCID:
PMC5716182
AbstractArticlePDF–3.8M
4.
Zfp296 negatively regulates H3K9 methylation in embryonic development as a component of heterochromatin
Takumi Matsuura, Satsuki Miyazaki, Tatsushi Miyazaki, Fumi Tashiro, Jun-ichi Miyazaki
Sci Rep. 2017; 7: 12462. Published online 2017 Sep 29. doi: 10.1038/s41598-017-12772-y
PMCID:
PMC5622089
AbstractArticlePDF–8.7M
5.
Continual removal of H3K9 promoter methylation by Jmjd2 demethylases is vital for ESC self‐renewal and early development
Marianne Terndrup Pedersen, Susanne Marije Kooistra, Aliaksandra Radzisheuskaya, Anne Laugesen, Jens Vilstrup Johansen, Daniel Geoffrey Hayward, Jakob Nilsson, Karl Agger, Kristian Helin
EMBO J. 2016 Jul 15; 35(14): 1550–1564. Published online 2016 Jun 6. doi: 10.15252/embj.201593317
PMCID:
PMC4899663
AbstractArticlePDF–2.1M
6.
The Demethylase JMJD2C Localizes to H3K4me3-Positive Transcription Start Sites and Is Dispensable for Embryonic Development
Marianne Terndrup Pedersen, Karl Agger, Anne Laugesen, Jens V. Johansen, Paul A. C. Cloos, Jesper Christensen, Kristian Helin
Mol Cell Biol. 2014 Mar; 34(6): 1031–1045. doi: 10.1128/MCB.00864-13
PMCID:
PMC3958041
AbstractArticlePDF–2.5M
7.
Epigenetic Regulation of miR-34a Expression in Alcoholic Liver Injury
Fanyin Meng, Shannon S. Glaser, Heather Francis, Fuquan Yang, Yuyan Han, Allison Stokes, Dustin Staloch, Jennifer McCarra, Jingang Liu, Julie Venter, Haiying Zhao, Xiuping Liu, Taylor Francis, Scott Swendsen, Chang-Gong Liu, Hidekazu Tsukamoto, Gianfranco Alpini
Am J Pathol. 2012 Sep; 181(3): 804–817. doi: 10.1016/j.ajpath.2012.06.010
PMCID:
PMC3432440
AbstractArticlePDF–1.5M
8.
Effects of the loss of Atox1 on the cellular pharmacology of cisplatin
Roohangiz Safaei, Mohammad H. Maktabi, Brian G. Blair, Christopher A. Larson, Stephen B. Howell
J Inorg Biochem. Author manuscript; available in PMC 2010 Aug 10.
Published in final edited form as: J Inorg Biochem. 2009 Mar; 103(3): 333–341. Published online 2008 Nov 30. doi: 10.1016/j.jinorgbio.2008.11.012
PMCID:
PMC2919289
AbstractArticlePDF–3.1M
9.
Jmjd1a and Jmjd2c histone H3 Lys 9 demethylases regulate self-renewal in embryonic stem cells
Yuin-Han Loh, Weiwei Zhang, Xi Chen, Joshy George, Huck-Hui Ng
Genes Dev. 2007 Oct 15; 21(20): 2545–2557. doi: 10.1101/gad.1588207
PMCID:
PMC2000320
AbstractArticlePDF–1.0M
10.
Jmjd2b antagonizes H3K9 trimethylation at pericentric heterochromatin in mammalian cells
Barna D. Fodor, Stefan Kubicek, Masato Yonezawa, Roderick J. O’Sullivan, Roopsha Sengupta, Laura Perez-Burgos, Susanne Opravil, Karl Mechtler, Gunnar Schotta, Thomas Jenuwein
Genes Dev. 2006 Jun 15; 20(12): 1557–1562. doi: 10.1101/gad.388206
PMCID:
PMC1482475
AbstractArticlePDF–406K
11.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
12.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
13.
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells
Doug Stryke, Michiko Kawamoto, Conrad C. Huang, Susan J. Johns, Leslie A. King, Courtney A. Harper, Elaine C. Meng, Roy E. Lee, Alice Yee, Larry L'Italien, Pao-Tien Chuang, Stephen G. Young, William C. Skarnes, Patricia C. Babbitt, Thomas E. Ferrin
Nucleic Acids Res. 2003 Jan 1; 31(1): 278–281. doi: 10.1093/nar/gkg064
PMCID:
PMC165511
AbstractArticlePDF–217K
14.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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