PMC Links for GEO Profiles (Select 131685721) - PMC

Select item 81650301.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 79033512.

Stress-induced NEDDylation promotes cytosolic protein aggregation through HDAC6 in a p62-dependent manner

Soyeon Kim, Mira Kwon, Yiseul Hwang, Junghyun Yoon, Sangwook Park, Ho Chul Kang

iScience. 2021 Mar 19; 24(3): 102146. Published online 2021 Feb 6. doi: 10.1016/j.isci.2021.102146

PMCID:: PMC7903351

Abstract Article PDF–49M

Select item 67781373.

The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis

Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca, Liviu Copoiu, Anton J. Enright, Giuliano Callaini, Maria Giovanna Riparbelli, Lu Yu, Jyoti S. Choudhary, Enrico Ferrero, Sally Wheatley, Max E. Douglas, Masanori Mishima, Pier Paolo D’Avino

Nat Commun. 2019; 10: 4513. Published online 2019 Oct 4. doi: 10.1038/s41467-019-12507-9

PMCID:: PMC6778137

Abstract Article PDF–7.8M

Select item 64169204.

Bioinformatic exploration of OLFML2B overexpression in gastric cancer base on multiple analyzing tools

Jiaxin Liu, Zhao Liu, Xiaozhi Zhang, Tuotuo Gong, Demao Yao

BMC Cancer. 2019; 19: 227. Published online 2019 Mar 13. doi: 10.1186/s12885-019-5406-x

Correction in:: BMC Cancer. 2019; 19: 759.

PMCID:: PMC6416920

Abstract Article PDF–1.8M

Select item 61666825.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 58269266.

VIRMA mediates preferential m⁶A mRNA methylation in 3′UTR and near stop codon and associates with alternative polyadenylation

Yanan Yue, Jun Liu, Xiaolong Cui, Jie Cao, Guanzheng Luo, Zezhou Zhang, Tao Cheng, Minsong Gao, Xiao Shu, Honghui Ma, Fengqin Wang, Xinxia Wang, Bin Shen, Yizhen Wang, Xinhua Feng, Chuan He, Jianzhao Liu

Cell Discov. 2018; 4: 10. Published online 2018 Feb 27. doi: 10.1038/s41421-018-0019-0

PMCID:: PMC5826926

Abstract Article PDF–2.3M

Select item 41245217.

Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization

Dan E. Arking, Sara L. Pulit, Lia Crotti, Pim van der Harst, Patricia B. Munroe, Tamara T. Koopmann, Nona Sotoodehnia, Elizabeth J. Rossin, Michael Morley, Xinchen Wang, Andrew D. Johnson, Alicia Lundby, Daníel F. Gudbjartsson, Peter A. Noseworthy, Mark Eijgelsheim, Yuki Bradford, Kirill V. Tarasov, Marcus Dörr, Martina Müller-Nurasyid, Annukka M. Lahtinen, Ilja M. Nolte, Albert Vernon Smith, Joshua C. Bis, Aaron Isaacs, Stephen J. Newhouse, Daniel S. Evans, Wendy S. Post, Daryl Waggott, Leo-Pekka Lyytikäinen, Andrew A. Hicks, Lewin Eisele, David Ellinghaus, Caroline Hayward, Pau Navarro, Sheila Ulivi, Toshiko Tanaka, David J. Tester, Stéphanie Chatel, Stefan Gustafsson, Meena Kumari, Richard W. Morris, Åsa T. Naluai, Sandosh Padmanabhan, Alexander Kluttig, Bernhard Strohmer, Andrie G. Panayiotou, Maria Torres, Michael Knoflach, Jaroslav A. Hubacek, Kamil Slowikowski, Soumya Raychaudhuri, Runjun D. Kumar, Tamara B. Harris, Lenore J. Launer, Alan R. Shuldiner, Alvaro Alonso, Joel S. Bader, Georg Ehret, Hailiang Huang, W.H. Linda Kao, James B. Strait, Peter W. Macfarlane, Morris Brown, Mark J. Caulfield, Nilesh J. Samani, Florian Kronenberg, Johann Willeit, CARe Consortium, COGENT Consortium, J. Gustav Smith, Karin H. Greiser, Henriette Meyer zu Schwabedissen, Karl Werdan, Massimo Carella, Leopoldo Zelante, Susan R. Heckbert, Bruce M. Psaty, Jerome I. Rotter, Ivana Kolcic, Ozren Polašek, Alan F. Wright, Maura Griffin, Mark J. Daly, DCCT/EDIC, David O. Arnar, Hilma Hólm, Unnur Thorsteinsdottir, eMERGE consortium, Joshua C. Denny, Dan M. Roden, Rebecca L. Zuvich, Valur Emilsson, Andrew S. Plump, Martin G. Larson, Christopher J. O'Donnell, Xiaoyan Yin, Marco Bobbo, Adamo P. D'Adamo, Annamaria Iorio, Gianfranco Sinagra, Angel Carracedo, Steven R. Cummings, Michael A. Nalls, Antti Jula, Kimmo K. Kontula, Annukka Marjamaa, Lasse Oikarinen, Markus Perola, Kimmo Porthan, Raimund Erbel, Per Hoffmann, Karl-Heinz Jöckel, Hagen Kälsch, Markus M. Nöthen, HRGEN consortium, Marcel den Hoed, Ruth J.F. Loos, Dag S. Thelle, Christian Gieger, Thomas Meitinger, Siegfried Perz, Annette Peters, Hanna Prucha, Moritz F. Sinner, Melanie Waldenberger, Rudolf A. de Boer, Lude Franke, Pieter A. van der Vleuten, Britt Maria Beckmann, Eimo Martens, Abdennasser Bardai, Nynke Hofman, Arthur A.M. Wilde, Elijah R. Behr, Chrysoula Dalageorgou, John R. Giudicessi, Argelia Medeiros-Domingo, Julien Barc, Florence Kyndt, Vincent Probst, Alice Ghidoni, Roberto Insolia, Robert M. Hamilton, Stephen W. Scherer, Jeffrey Brandimarto, Kenneth Margulies, Christine E. Moravec, Greco M. Fabiola Del, Christian Fuchsberger, Jeffrey R. O'Connell, Wai K. Lee, Graham C.M. Watt, Harry Campbell, Sarah H. Wild, Nour E. El Mokhtari, Norbert Frey, Folkert W. Asselbergs, Irene Mateo Leach, Gerjan Navis, Maarten P. van den Berg, Dirk J. van Veldhuisen, Manolis Kellis, Bouwe P. Krijthe, Oscar H. Franco, Albert Hofman, Jan A. Kors, André G. Uitterlinden, Jacqueline C.M. Witteman, Lyudmyla Kedenko, Claudia Lamina, Ben A. Oostra, Gonçalo R. Abecasis, Edward G. Lakatta, Antonella Mulas, Marco Orrú, David Schlessinger, Manuela Uda, Marcello R.P. Markus, Uwe Völker, Harold Snieder, Timothy D. Spector, Johan Ärnlöv, Lars Lind, Johan Sundström, Ann-Christine Syvänen, Mika Kivimaki, Mika Kähönen, Nina Mononen, Olli T. Raitakari, Jorma S. Viikari, Vera Adamkova, Stefan Kiechl, Maria Brion, Andrew N. Nicolaides, Bernhard Paulweber, Johannes Haerting, Anna F. Dominiczak, Fredrik Nyberg, Peter H. Whincup, Aroon Hingorani, Jean-Jacques Schott, Connie R. Bezzina, Erik Ingelsson, Luigi Ferrucci, Paolo Gasparini, James F. Wilson, Igor Rudan, Andre Franke, Thomas W. Mühleisen, Peter P. Pramstaller, Terho J. Lehtimäki, Andrew D. Paterson, Afshin Parsa, Yongmei Liu, Cornelia van Duijn, David S. Siscovick, Vilmundur Gudnason, Yalda Jamshidi, Veikko Salomaa, Stephan B. Felix, Serena Sanna, Marylyn D. Ritchie, Bruno H. Stricker, Kari Stefansson, Laurie A. Boyer, Thomas P. Cappola, Jesper V. Olsen, Kasper Lage, Peter J. Schwartz, Stefan Kääb, Aravinda Chakravarti, Michael J. Ackerman, Arne Pfeufer, Paul I.W. de Bakker, Christopher Newton-Cheh

Nat Genet. Author manuscript; available in PMC 2015 Feb 1.

Published in final edited form as: Nat Genet. 2014 Aug; 46(8): 826–836. Published online 2014 Jun 22. doi: 10.1038/ng.3014

PMCID:: PMC4124521

Abstract Article PDF–970K

Select item 38546698.

Genome Wide Association Study (GWAS) of Chagas Cardiomyopathy in Trypanosoma cruzi Seropositive Subjects

Xutao Deng, Ester C. Sabino, Edecio Cunha-Neto, Antonio L. Ribeiro, Barbara Ianni, Charles Mady, Michael P. Busch, Mark Seielstad, the REDSII Chagas study group from the NHLBI Retrovirus Epidemiology Donor Study-II (REDS-II), International Component

PLoS One. 2013; 8(11): e79629. Published online 2013 Nov 20. doi: 10.1371/journal.pone.0079629

PMCID:: PMC3854669

Abstract Article PDF–408K

Select item 35119849.

Genome-wide Association and Population Genetic Analysis of C-Reactive Protein in African American and Hispanic American Women

Alex P. Reiner, Sandra Beleza, Nora Franceschini, Paul L. Auer, Jennifer G. Robinson, Charles Kooperberg, Ulrike Peters, Hua Tang

Am J Hum Genet. 2012 Sep 7; 91(3): 502–512. doi: 10.1016/j.ajhg.2012.07.023

PMCID:: PMC3511984

Abstract Article PDF–742K

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 293670611.

Olfactomedin Domain-Containing Proteins: Possible Mechanisms of Action and Functions in Normal Development and Pathology

Stanislav I. Tomarev, Naoki Nakaya

Mol Neurobiol. Author manuscript; available in PMC 2010 Oct 1.

Published in final edited form as: Mol Neurobiol. 2009 Oct; 40(2): 122–138. Published online 2009 Jun 26. doi: 10.1007/s12035-009-8076-x

PMCID:: PMC2936706

Abstract Article PDF–2.3M

Select item 289646412.

Personalized Smoking Cessation: Interactions between Nicotine Dose, Dependence and Quit-Success Genotype Score

Jed E Rose, Frédérique M Behm, Tomas Drgon, Catherine Johnson, George R Uhl

Mol Med. 2010 Jul-Aug; 16(7-8): 247–253. Published online 2010 Mar 17. doi: 10.2119/molmed.2009.00159

Correction in:: Mol Med. 2012; 18(1): 729.

PMCID:: PMC2896464

Abstract Article PDF–2.4M

Select item 281034413.

An Integrative Predictive Model of Coronary Artery Calcification in Arteriosclerosis

Michael McGeachie, Rachel L Badovinac Ramoni, Josyf C. Mychaleckyj, Karen L Furie, Jonathan M. Dreyfuss, Yongmei Liu, David Herrington, Xiuqing Guo, João A. Lima, Wendy Post, Jerome I. Rotter, Stephen Rich, Michèle Sale, Marco F. Ramoni

Circulation. Author manuscript; available in PMC 2010 Dec 15.

Published in final edited form as: Circulation. 2009 Dec 15; 120(24): 2448–2454. doi: 10.1161/CIRCULATIONAHA.109.865501

PMCID:: PMC2810344

Abstract Article PDF–448K

Select item 270495714.

Common Genetic Variation Near the Phospholamban Gene Is Associated with Cardiac Repolarisation: Meta-Analysis of Three Genome-Wide Association Studies

Ilja M. Nolte, Chris Wallace, Stephen J. Newhouse, Daryl Waggott, Jingyuan Fu, Nicole Soranzo, Rhian Gwilliam, Panos Deloukas, Irina Savelieva, Dongling Zheng, Chrysoula Dalageorgou, Martin Farrall, Nilesh J. Samani, John Connell, Morris Brown, Anna Dominiczak, Mark Lathrop, Eleftheria Zeggini, Louise V. Wain, for the The Wellcome Trust Case Control Consortium, The DCCT/EDIC Research Group, Christopher Newton-Cheh, Mark Eijgelsheim, Kenneth Rice, Paul I. W. de Bakker, for the QTGEN consortium, Arne Pfeufer, Serena Sanna, Dan E. Arking, for the QTSCD consortium, Folkert W. Asselbergs, Tim D. Spector, Nicholas D. Carter, Steve Jeffery, Martin Tobin, Mark Caulfield, Harold Snieder, Andrew D. Paterson, Patricia B. Munroe, Yalda Jamshidi

PLoS One. 2009; 4(7): e6138. Published online 2009 Jul 9. doi: 10.1371/journal.pone.0006138

PMCID:: PMC2704957

Abstract Article PDF–237K

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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